Pseudomonas sp. GM30, PMI25_000888

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGCCTAAGGCTCTGCTGTCCAACGAAGTTGACCGTCTGCGCGTGCAGGCTGTTCAGCAGTTCGGCGGCAACATCAAGCCTGACCAACTGCCGGCCGAGC TGTTCGAAGAGCAAGCCAAGCGCCGTGTAGTGCTGGGTCTGATCGTGGCTGAAGTGGTCAAGCAGTTCGACCTGAAGCCTGACGAAGCCCGCGTTCGTGA AATGATTCAGGAAATGGCTTCGGCTTACCAGGAACCTGAGCAGGTCGTGTCCTGGTACTACAAGAACGAGCAGCAACTGAACGAAGTTCGTTCGGTTGTG CTGGAAGAACAAGTTGTGGATACTGTTCTGCAGAAAGCTAGCGTGACCGACAAATCGGTCTCTTACGAAGAAGCGGTCAAGCCGGTAGAAGCTCCAAAAG CCGACTGATTGTTTTTGCGTTAAGAAGTACACACATAAGCCAGCCTTCGAGCTGGCTTATGCGTATTCAAGACATAACTATTTGGGAGTGACTGCAGAGC
DNA Sequence for Gene
>PMI25_000888
ATGTTCCGTAATTCGTATATTCAGCAGAACTCTGATATCCAGGCCGCCGGCGGCCTGGTCCCGATGGTTGTCGAGCAATCTGCTCGTGGCGAGCGCGCCT ATGACATCTACTCGCGCCTTCTGAAGGAGCGCGTAATCTTTCTGGTGGGTCCTGTAGAGGACTACATGGCCAACCTGATCTGTGCGCAATTGCTGTTCCT TGAAGCGGAAAACCCGGACAAGGACATCCATCTCTATATCAACTCCCCGGGCGGTTCGGTGACAGCGGGCATGTCGATCTACGACACCATGCAGTTCATC AAGCCAAACGTATCGACGACCTGCATTGGTCAGGCGTGCAGCATGGGTGCATTCCTGCTGACGGCCGGTGCTCCAGGCAAGCGTTTCTGCCTGCCGAACT CGCGTGTGATGATTCACCAGCCACTGGGCGGTTTCCAGGGCCAGGCGTCGGATATCGAAATCCATGCCAAGGAAATCCTGTTCATTCGCGAGCGTCTGAA CACGCTGATGGCCAAGCACAGCGGTCGTACGCTTGAAGAAATCGAGCGCGACACCAACCGCGACAACTTCATGAGTGCAGAAGCTGCGAAGGAATACGGT CTGATCGACGAAGTCATCAACCAGCGTCCTGCGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATAAGCAGCTCAAAATAAGGTGGGTCGGCAGGTCCGACCACCAGCGGGCTTGAAAAAGCCCGCAATAGCCTTCATCTTGTGTTGCAAGCCTATCGGATT TGGATCGAACGAATGACTGACACCCGCAACGGCGAGGACAACGGCAAGCTGCTCTATTGCTCCTTCTGTGGCAAAAGCCAGCATGAAGTGCGCAAATTGA TTGCCGGCCCCTCGGTCTTTATCTGCGACGAGTGCGTCGACCTGTGCAATGACATCATCCGCGAGGAGGTGCAGGAAGCACAGGCCGAAAGCAGCGCGCA TAAATTGCCTTCGCCTAAAGAAATCAGCGGCATCCTTGACCAGTATGTAATCGGTCAGGAGCGTGCGAAAAAGGTTCTGGCCGTAGCGGTGTACAACCAC TACAAGCGCCTGAATCAGCGTGACAAGAAGGCTGACGACGTCGAACTCGGCAAGAGCAACATCCTGCTGATCGGCCCGACAGGCTCCGGTAAAACCCTGC
Amino Acid Sequence
>ATP-dependent Clp protease proteolytic subunit
MFRNSYIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFI KPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAKEYG LIDEVINQRPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site