Pseudomonas sp. GM30, PMI25_000568

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGTAATCGATGCGCGGAATGACCGCCGTGGATTCGATTTCGACATTCGGCACTTTGCCGCCCAACGAACTGATGTTGAGCTTGGTCGACTTGTAATGGT TGTAGTAGAGGTTGAACGCGACCATGTTCTCCGGAAGGCTGTCGACCTCCAGCGGCAGCATGAAGAACCCGTCGGTGCCGGGGCCGATGTTGTCGACGCC GGCTTCGGTGGCCAGGGCTGGCAGGGACGCGGTGCAACCGAGCAAGGTCAGTGCCAGACGCAAGGGGAAAGTGGCGCGGTTCGGGCTCATGGCTGTCCTC ATTATTATTGTGGTGGGACGTGGCGCCGGTACGCAGAACGTCCGGCACTATAGAAATAAGCGCTTGGCGCCCGCCGGGGCAGGGTATTGGCGGACAGTTA GGGGGACTTCTGCGGACAGTCGGCCAACCCTGTGCTAACGTCGTTCGACATAACCGGTTACAAAAATAACAATCAAGCGTGATCCGGAATGTCAGCCCCC
DNA Sequence for Gene
>PMI25_000568
ATGAACGTAAAAGTCCAAGACCCCACTTTCGAATTGGCGCTGGTCTCGCCGTTCCTTCTGCAAACCCTCGCCGAAGTCGTGCAGAACAAAGGCATCGACC CCGAAAGCCTGTGCCGTGGCCTGGGTTTCACCCTCGAAGATCTGCAGGATCCGGCGCAGCGGATCTCCTACCGCCAGGCCGTGGCGATGATTCAGCGCGC GCTCAAAGTGCTGCCCAATCAGGGGCTGGGGTTGTGGGTCGGGGCGCAGAATGTGTTGGGGACGCTGGGGCTGCTCGGCCATGTGCTGTCGCTGTGCAAG ACCTTGCGCGATGCCTTCGCCCTCGGCATCCGCCACCAGCACACCTCCGGCGGAATCGTGGTGTCTAGCGTCGATGTGGTCGGCGATCAGGTGCAGTTGA ACGCCGAGTGCCGCTTGCCGTTCGCCGATGTCCAGGTGTTCGCCGTCGAAGAATTTTTCGCCAGCCTGCTGGTGTATGGCCGGGCCTTGGCGGGCAATGA CTTCAAGGCGATTGCCGTGGAGTTCGTGCACGCCGCGCCGGATTACCTGAGCGAATACCACCGCCTGCTCGGGCCGGACGTACGCTTCGGCTGCCTGCAC AACCGCATGCTGATCGATGCGCAATGGCTGGACGTCAATCTGCCCAACCATCATTCGCTGGCGCTGCGTCAGGCGGTGGCCTTGCTGGAGCTGGAAGCGG CGCAGGTACACCAGAAACTCGATCTGATTCAGGCGGTGGAACGGGCAATTGCCCGAGATTTGAGCCGGGGCAGCCATATCGAAAAAATCGCCGGCGACCT GAACATGAGCAGCCGCACCTTGCGCCGCCGTTTGACCGAGCATGCGCTGACCTTCGAGGCACTGCTGGAGCAGGTGCGTCAGGCGCGGACCATGAGTCTG CTGGCCAATCCGGACATGCCCATCGAGCGGATTACCGAAGAGGTCGGCTACAGCGATGTACGCAGTTTCCGCCGGGCGTTCAAGCGCTGGACCGGGATGA GCCCGAGTGCGTGGCGCCAGGATGCAAGCACCGCTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATCGTTCCCTGTGGCGAGGGAGCTTGCTCCCGCCGGACTGCGCAGCAGACCCAAAACCTGCCACGCCATTCCTCCAGACACACCTTGCCGGCGGGGTT CGCGGGTGCTTCGCCCCCGAGCGGGAGCAAGCTCCCTCGCCACAGGCTTCCGTGCGCCACTCACCAGTATTTCAACCCCACAAACCCTCCGGCCACAGGT AAACTCCCGCGCACTTTCCCAAGGAGTTCACATGAGTTACTACCAGCCGGGCATTCTCGCCACCCCTGTTCCTGCGCAAGCACGTCACCTGTTTTTTGCC CTTGCGTCGGTTGAAGCACTGCCGCAGGCGATCGACAACCTGATGAATCTGGTGGACGGCAAGTCGGCTGTGATCGGTTTCGGTGAATCCCTGACCAAAG CCCTGAACGTGCAAATCGACGGTCTGCGCAGCTTTCCGGCCATGAGCGGCGTCGGCGTGGAAAACCCGTCGACCCAGCACGCACTGTGGGTCTGGCTGCA
Amino Acid Sequence
>AraC family transcriptional regulator
MNVKVQDPTFELALVSPFLLQTLAEVVQNKGIDPESLCRGLGFTLEDLQDPAQRISYRQAVAMIQRALKVLPNQGLGLWVGAQNVLGTLGLLGHVLSLCK TLRDAFALGIRHQHTSGGIVVSSVDVVGDQVQLNAECRLPFADVQVFAVEEFFASLLVYGRALAGNDFKAIAVEFVHAAPDYLSEYHRLLGPDVRFGCLH NRMLIDAQWLDVNLPNHHSLALRQAVALLELEAAQVHQKLDLIQAVERAIARDLSRGSHIEKIAGDLNMSSRTLRRRLTEHALTFEALLEQVRQARTMSL LANPDMPIERITEEVGYSDVRSFRRAFKRWTGMSPSAWRQDASTA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site