Pseudomonas sp. GM30, PMI25_001333
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM30 ctg3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGACCCGGAAAGTCGTCATCGCTACCCGCACGAATTTTCCGGTGGTCAGCGCCAGCGCATCGCCATCGCCCGCGCGCTGGTGCTGAAACCGGCGTTGA TCCTGCTCGACGAGCCGACCTCGGCCCTCGACCGTACAGTGCAGAAACAAGTGGTCGCCCTGCTCCGCGACCTTCAGGAAAAACATGGCCTGACCTACCT GTTCATCAGCCACGACCTGGCGGTGGTTCGGGCGCTGGCACATGACATGATCGTGATCAAGGATGGAAAGGTGGTCGAGCGCGGTGCCAGCCATGAGGTG TTCGACTCGCCGCAGCATCCTTACACCAAAGAGCTGTTGGCGGCGGCGCATCCGGGGTAGGCATAATCGGCGCTTGCCTTGATACCGAGTCGCATCTATC GCGAGCAGGCTCACTCCTACAGTGGAACGCATTCCAAATGTAGGAGTGAGCCTGCTCGCGATGGCGTCGCCACAGCCGAAACACATTCAGGATCTGTCAG
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| DNA Sequence for Gene |
>PMI25_001333
ATGAACACCTCCGAAAGCCTCAAGGACTACCAACGCGTGCGCACGCTGGCGATCCGCTCGCTGTTCGAGATCATCGAGCAGTCCAGCGAAGGCACGGTGA TTGTCGATCGTGATGCGAACATCGTCTGGATGAACGAGCGCTATGCCCGGCGTTTTGGGCTGGAGTCGGCGAAAAAAGCCATCGGCAAACCCTGCGAAAG CGTGATCCCCGGCAGCTTGTTGCGTGAAGTGGTGCGCACCGGCCGGCCAATCCTGCTGGACATGCAGGACACACCGAAAGAGCCGCTGGTGGTGATGCGC CTGCCAATCCACGACGACGCCGGGGCGGTGATTGGCGCCATCGGGTTTGCCCTGTTCGATGAATTGCGCAGCCTGTCGCCGATGCTCAAGCGCTACCTGA GCATGCAGGAAGAACTGGCCTCGACCCGCTCCCTGTTAAGAGCGCGGCAGACCAAATACAACTTCGCCCATTTCATCGGCACCAGCAGCGCCAGCCTCGA GGTCAAGCGCCGCGCCCGCCGCAGCGCCAGCGCCGAATCCCCGGTGTTGCTGCTCGGCGAAACCGGCACCGGCAAGGAGTTGCTGGCCCAGGCGATTCAC AGCGCCTCGCCCCGCGCGCACAAGGCGTTCGTCAGCATCAACAGCGCGGCCATTCCCGAAGCGCTGCTGGAAGCCGAATTCTTCGGCACCGCGCCTGGTG CGTTTACCGGCGCCGACCGCAAGGGTCGCACCGGCAAGTTACAGATCGCTCAGGGCGGCACGCTGTTTCTCGATGAGATCGGCGACATGCCGTTGCCGCT GCAGAGCAAACTGCTGCGGGTGCTGCAGGAAAAGGAGTTCGAGCCGGTTGGCTCCAACGACGTGATCCAGAGCGATGTGCGAGTGATCGCGGCGACGTCG ACCGATCTGCAAGCCGCGATCAAGCGCGGCGAGTTCCGCGCCGACCTGTATTACCGCCTCAACGTGCTGCCGATCCAGGTCCCGCCACTGCGCGAGCGCC TCGACGATCTGCCAGCGCTCAGCGAGGCGATCCTTGAAGAGCTGCGCAGTCAGCATGAGCTGAGTCGCGCAGCGCTGGAATTGCTCGGACAACATGCGTG GCCGGGCAACATCCGTGAGTTGCGCAACGTGCTGGAACGCGCGGCGCTGCTCAGCGATGACCTGATCCTCACCGAAGAGGATATTCGCGCGGCCATCGGC ACCTTTACCCCGGTTGAGCGCCCGTCGGTGTCGACGCGAGAGCCGTTGGCGGATGAGACTTTCGCCGAGGCACGGCAGCGGTTTGAGCGGCAGTTGATCC AGTCCGCCCTCGCGCAATGTGCGGGCAAAGTGCCGGAGGCGGCGGCTCGGTTGGGGTTGGGGCGGTCGACGTTGTACAAGAAGATGGTGGCCTTGGGGAT CGCCGAGTCTCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGAGATTTAGTCTCGCTAGCGAGACATTAACTTCAAGATCCAGAGATCGCAGCCTTCGGCGGCTCCTACAGGGTAGATACGGACATTCCATGTAGGAGCT GCCGAAGGCTGCGATCTTTTGATCTTGAAAAAGTCTCACTATCGAGACAACCCTTCAAACAGCTCAACGCAAAAAATCAACAAAACCTATATATTTCAAC GTGTTACAAAGCTGGCACACATCTCGCTATAGCTCCCTCCTACCTGGCAACACCCACAAAAATAACAATCCCTGGAGACACTCCATGAGTGTGATCATCG CTTTGGCAGCCCTCGCGCTGCTGATGCTTGCCGCCTACCGTGGCTACAGCGTCATCCTCTTCGCCCCGATTGCCGCCCTCGGCGCCGTTTTGCTTACTGA CCCCTCCGCCGTCGCTCCAGCCTTTACCGGGGTGTTCATGGAGAAAATGGTCGGTTTCATCAAACTGTATTTCCCGGTATTCCTGCTCGGTGCCGTGTTC
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| Amino Acid Sequence |
>Fis family transcriptional regulator
MNTSESLKDYQRVRTLAIRSLFEIIEQSSEGTVIVDRDANIVWMNERYARRFGLESAKKAIGKPCESVIPGSLLREVVRTGRPILLDMQDTPKEPLVVMR LPIHDDAGAVIGAIGFALFDELRSLSPMLKRYLSMQEELASTRSLLRARQTKYNFAHFIGTSSASLEVKRRARRSASAESPVLLLGETGTGKELLAQAIH SASPRAHKAFVSINSAAIPEALLEAEFFGTAPGAFTGADRKGRTGKLQIAQGGTLFLDEIGDMPLPLQSKLLRVLQEKEFEPVGSNDVIQSDVRVIAATS TDLQAAIKRGEFRADLYYRLNVLPIQVPPLRERLDDLPALSEAILEELRSQHELSRAALELLGQHAWPGNIRELRNVLERAALLSDDLILTEEDIRAAIG TFTPVERPSVSTREPLADETFAEARQRFERQLIQSALAQCAGKVPEAAARLGLGRSTLYKKMVALGIAESQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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