Pseudomonas sp. GM30, PMI25_001146

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGACAACCAGGTCAACCCGAAAACCGGCACCATCCGTGGTCGCGCGGTGTTCGACAACAGCGACGGCACCTACACCCCGGGCCTGTACGCACGGCTGAA ACTGGTCGGCAGCGGCACCTATAACGCCATGCTGATCAACGACGAAGCCGTCGGCACCGATCTGGGCAAGAAGTTCGTGCTGGTGATGGATGCGGACAAC AAGACCGCCTACCGCGCGGTTGAACTGGGGCCGAAGATCGAAGGCCTGCGCATCGTGCGCACCGGTCTGAACAAGGACGACACGATCATCGTCAAGGGTC TGCAACGGGTACGTCCGGGTTCGCCGGTGACGCCTGAAGTGATCCCGATGGCCAGCGAGCAGACCATTGCCGCGCTGGCTCAACAACGTCAAGCGCTGGA AGCCAGCAACCTGCCCAAAGTCGCACCCGCCAAAGGTGCACAGGGTACGGCTGTGAAGCTGGCCGCTACGACCCCACGCGGTTAAGGGACGACAACTCCG
DNA Sequence for Gene
>PMI25_001146
ATGAATTTTTCCCAATTCTTCATTTCACGGCCAATCTTCGCAGCGGTGCTCTCGCTGTTGATCCTGATCGCCGGTGCGATCTCGCTGTTCCAGCTGCCGA TCAGCGAATACCCGGAAGTCGTGCCGCCGACCGTGGTGGTGCGTGCCAACTTCCCGGGCGCCAACCCCAAAGTCATCGGTGAAACCGTGGCCGCTCCGCT GGAGCAGGCCATCACCGGCGTCGAGAACATGCTGTACATGTCCTCGCAGTCCACCGCTGACGGCAAGATCACCCTGACCATCACCTTCGCCCTGGGCACT GACCTGGACAATGCGCAGGTGCAGGTGCAAAACCGGGTGACCCGGACCGAGCCGAAACTTCCTGAAGAAGTGACGCGCATCGGTATCACCGTCGACAAGG CCTCGCCCGACCTGACCATGGTTGTGCACTTGACCTCGCCGGACAAACGCTACGACATGCTCTACCTGTCCAACTACGCGATCCTCAACATCAAGGATGA GCTGGCGCGTCTGGGTGGTGTCGGTGACGTGCAACTGTTCGGTATGGGCGATTACTCGCTGCGGGTCTGGCTTGATCCGAACAAGACTGCTTCGCGCAAC CTGACCGCCACCGACGTGGTGACGGCGATTCGTGAACAGAACCGTCAGGTCGCTGCCGGTCAGCTCGGTGCACCCCCTGCCCCGAATGCCCAGAGCTTCC AGCTGTCGGTCAACACTCAGGGCCGTCTGGTTTCTGAAGAAGAGTTCGAGAACATCATCATTCGCTCCGGCGACAACGGTGAAATCACTCGCCTCAAGGA CATCGCACGCGTTGAGCTCGGTTCCAGCCAGTACGCCCTGCGTTCGCTGCTGAACAACCAGCCAGCGGTGGCGATCCCGATCTTCCAGCGTCCAGGCTCG AACGCCATCGATATCTCGAACGAAGTTCGCGGCAAGATGGAAGAGCTGAAGAAAGGCTTCCCGCAAGGCATGGACTACAGCATCGTCTATGACCCGACGA TCTTCGTACGCGGCTCGATCGAGGCGGTGGTTCACACCCTCTTCGAAGCGCTGATCCTCGTGGTGCTGGTGGTGATTCTGTTCCTGCAGACCTGGCGCGC CTCGATCATTCCGTTGGTGGCGGTGCCGGTATCGTTGATCGGTACATTTGCGGTGATGCACCTGTTCGGCTTCTCGCTCAACGCCCTGTCGCTGTTCGGC CTGGTACTGGCGATCGGTATCGTCGTGGACGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCAACATAGAACTGGGGCTCAACCCGTTCGATGCAACCA AAAAGGCCATGGGTGAAGTGACCGGCCCGATCATCGCCACGGCGCTGGTGCTGTGTGCGGTGTTTGTGCCGGCGGCGTTCATCTCCGGCCTCACCGGGCA GTTCTACAAGCAGTTTGCGTTGACCATTGCGATCTCGACCGTGATCTCCGCGTTCAACTCGCTGACCCTGTCGCCGGCACTGGCCGCTGTGTTGCTGAAA AGTCATGACGCGCCGAAAGACCGCTTCTCCAAAGTGCTCGACAAGATCTTTGGTGGCTGGTTGTTCCGTCCGTTCAACCGTTTCTTTGACAAGGCCAGCC ACGGTTATGTCGGTACTGTGCGCCGGGTCATCCGTGGCAGCGGCATCGCCCTGCTGTTGTATGCAGGCCTGATGGTGCTGACGTTCTTCGGCTTCTCCAG CACCCCGACCGGTTTCGTACCCGGCCAGGACAAGCAATACCTGGTGGCCTTCGCGCAACTGCCGGACGCCGCGAGTCTGGATCGCACCGAAGACGTGATC AAGCGCATGTCCGACCTGGCGCTGAAACAGCCAGGTGTGGAAAGCGCCGTAGCGTTCCCGGGCTTGTCGATCAACGGCTTCACCAACAGCCCGAACGCCG GCATCGTGTTCGTGACCCTGAAACCGTTCGATGAGCGTAAAGACCCGAGCATGTCCGCCGGTGCCATCGCCGGGGCCTTGAACGGTCAGTACGCGAACAT TCAGGAAGCGTACATGGCGATCTTCCCGCCGCCGCCGGTACAAGGTCTGGGCACCATTGGCGGGTTCCGCCTGCAAATCGAAGACCGGGGCAACCTGGGC TACGACGAGCTGTACAAAGAGACGATGAACATCATCACCAAAAGCCACAGCGTGCCTGAGCTTGCGGGGCTGTTCACCAGCTACACCGTGAACGTGCCGC AGGTCGATGCCGCCATCGACCGCGAAAAAGCCAAGACCCACGGCGTGGCCGTCAGCGACATCTTCGACACCCTGCAGATCTACCTGGGTTCGCTGTATGC CAACGACTTCAACCGCTTCGGGCGTACCTATCAGGTCAACGTTCAGGCTGAGCAACAGTTCCGCCTCGAATCCGACCAGATCGGCCAGCTGAAAGTGCGC AACAACAAGGGCGAAATGATCCCGCTGGCGACCTTCATCAAGGTCAGCGACACCTCGGGCCCTGATCGCGTGATGCACTACAACGGTTTCATCACCGCAG AAATCAACGGTGCGGCAGCCCCCGGCTACAGCTCCGGCCAAGCCGAAAAAGCCATCGAGAAACTGCTTAAAGATGAGCTGCCAAACGGCATGACCTACGA GTGGACCGACCTGACCTACCAGCAGATTCTGTCCGGCAACACTGCGCTGTTCGTGTTCCCGCTCTGCGTACTGCTGGCGTTCCTGGTGCTCGCCGCTCAA TACGAAAGCTGGAGCCTGCCACTGGCGGTGATCCTGATCGTACCGATGACCCTGCTGTCGGCCATCACCGGCGTGATTGTCTCCGGCGGCGACAACAACA TCTTCACCCAGATCGGCCTGATCGTACTGGTGGGACTTGCCTGTAAGAACGCGATTTTGATCGTCGAATTCGCCAAGGACAAACAGCTGGAAGGCCTCGA TCCGCTGGCAGCGGTACTGGAAGCCTGCCGTCTGCGTCTGCGGCCGATCCTGATGACCTCCTTCGCGTTCATCATGGGTGTGGTGCCACTGGTGTTCTCC AGCGGTGCCGGTGCCGAGATGCGTCACGCCATGGGTGTGGCGGTGTTCTCCGGGATGCTCGGGGTGACCTTCTTCGGGTTGTTGCTGACGCCAGTGTTCT ACGTGTTGATCCGTAATTTCGTCGAGCGCGGCGAAGCCCGCAAAGCGGCCAAAGCGCACGCTCTGCAAAAGCCACTGGAGGCGCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGTCTGAAAGTCTTCCTGCCGAGTCTGCTGGTGCTGGCGTTGAGCGCCTGCGCCGTCGGCCCTGACTACAAGACCCCGGCGACGGAGGCGGCCAACAT TACGACCGCCACCGACGGCGCTGCCGGTCAGAAGAACTTTGACCGTTCGAAATTCGAAGGCATCTGGTGGCAGCAATTCGACGACCCGACCCTCAACCAG TTGGTGACGCAATCGCTGCAAGGCAACCGTCAACTGCGCGTGGCATTCGCTCGTTGGAAAGCCGCCCGGGCGATCCGCGATGACGTCAGCAACGATGCGA TGCCGACCATCACCAGCCGCGCGAGCAGTGATCTGGCCAAGGGGCAAATCCCCGGCCAGACCACCAAACGGGTCAACAGCGAACGCTACGATCTGGGCCT GGACATGGCCTGGGAACTGGACCTGTTCGGGCGGATCCAGCGCAATCTGGAAGCCAGCGACGCCGACCAGCAGGCGGCCGAAGCCGATCTGTACCAACTG
Amino Acid Sequence
>transporter
MNFSQFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGT DLDNAQVQVQNRVTRTEPKLPEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAILNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTATDVVTAIREQNRQVAAGQLGAPPAPNAQSFQLSVNTQGRLVSEEEFENIIIRSGDNGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS NAIDISNEVRGKMEELKKGFPQGMDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIELGLNPFDATKKAMGEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK SHDAPKDRFSKVLDKIFGGWLFRPFNRFFDKASHGYVGTVRRVIRGSGIALLLYAGLMVLTFFGFSSTPTGFVPGQDKQYLVAFAQLPDAASLDRTEDVI KRMSDLALKQPGVESAVAFPGLSINGFTNSPNAGIVFVTLKPFDERKDPSMSAGAIAGALNGQYANIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLG YDELYKETMNIITKSHSVPELAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQIYLGSLYANDFNRFGRTYQVNVQAEQQFRLESDQIGQLKVR NNKGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGAAAPGYSSGQAEKAIEKLLKDELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVIVSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQLEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVFS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRNFVERGEARKAAKAHALQKPLEAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site