Pseudomonas sp. GM30, PMI25_001000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGCGTCTGGATCGTCTGGATTCGGCGCGTATCGGCAGCTCCCGCGCCATCACCCAGTTGATCCTCAACCTGGTGGAAGGCACACCGATCCGTCTGTTCG ACGGTGGCGAGCAGAAGCGTTGCTTCACCGACATCGCTGACGGCGTCGAGGCACTGGCGCGCATCATCGATAACGACAACGACGTGTGCAACGGCCAGAT CATCAACATCGGCAACCCGGACAACGAAGCCAGCATCCGTCAGTTGGGCGAAGAGCTGCTGCGTCAGTTCGAAGCGCACCCGCTGCGCCACAACTTCCCG CCGTTCGCCGGTTTCCGCGACGTGGAAAGCAAGGCGTTCTACGGTGCCGGTTACCAGGACGTGGAACACCGCAAACCAAGCATTGCCAACGCCAAGCGCC TGCTGAACTGGGAGCCGACCGTGGAAATGCGCGAGACCATCGGCAACACCCTGGACTTCTTCCTGCGTGAAGCCATGCTCGAAATCGCGGACAAGAAGTA
DNA Sequence for Gene
>PMI25_001000
ATGCAGGCAGGTCTTCGTATCGATGTCGACACCTACCGCGGCACCCGTGAAGGTGTGCCGCGACTGTTGGAGATGCTCGACGAGGCGCAGGTCAAGGCAA CGTTTTTCTTCAGTGTCGGCCCGGACAACATGGGCCGGCATCTGTGGCGCCTGATCCGCCCGCAGTTCCTCTGGAAAATGCTGCGCTCCAACGCTGCCGG CCTCTACGGCTGGGACATTTTGCTGGCCGGCACTGCCTGGCCCGGCAAACCGATTGGCCGTGATCTCGGGCACCTGATGCGTCAGGCCCGGGACGCCGGT CACGAAGTCGGCCTGCACGCCTGGGATCACCATGGCTGGCAGGCCAACGCCGGGCGCTGGAGCGACGCGCAACTGATCGAACAGATCCGGCGCGGCGTCG ACACCTTGAGCGACATCCTCGGCGAAAAGATCCAGTGTTCGGCCGCCGCCGGCTGGCGTGCGGACGAGCGCGTGATCGAGGCCAAGCAGACCTTCGGCTT TCGCTATAACAGCGATTGTCGAGGGCAGAGCCTGTTCCGTCCGCTGCTGGCGGACGGTTCGCTGGGCACTCCGCAGATTCCGGTGGACCTGCCGACCTTC GACGAAGTCGTCGGCCCGCACGTGGCGGCGAGGGACTTCAACGCCTTCATCCTCGACCGGTTCCAGTCGCAAGCACTCAACGTCTACACCATTCATGCCG AAGTAGAAGGGATTCTGATGGCTCAGGATTTTCGCCAGTTGCTAGCTGATGCACGCCAGCGCCACATTGACTTCAAACCCTTGGGCGACTTGTTGCCCGA GTTCTTCAACACCCTGCCCGTAGGCCGCGTGCAACGCGGTGTGCTCGAAGGCCGTGAAGGCTGGCTGGGAGTGCAAGGCGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAGACGCTGGGCACTGCCGCTGTTGGTCGGCCTCTGTCTGCTGGCCTATCTGTTGCCGTTGAGCACCCATGGCCTGTGGATCCCCGACGAAACCCGTTA CGCACAGATCAGCCAGGACATGCTGCTCAGTGGCAACTGGGTGTCGCCGCATTTCATGGGGCTGCGGTATTTCGAGAAACCGATTGCCGGCTACTGGATG ATCGCCATCGGCCAGGAATTGTTCGGGCAGAATCTGTTCGGCGTGCGCTTCGCCTCGGCCCTCAGCACGGCGTTGAGTGTGCTGCTGGCCTACCTGGTCG CGCGCAGGCTATGGAACGATCCGCGCAAGAGCTTCGTCTGCGCCCTGCTCTACATGAGCTTCACGGTCGTCGCCGGTCAGGCCGGGTACGCCAACCTCGA TCCGCAGTTCACCTTCTGGGTCAACCTGAGTCTGGTGGCGCTGTGGTTTGCGCTCGACAGCCGCAGCACCGGGCAACGGCTGGGCGCATGGGCGCTGCTG
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MQAGLRIDVDTYRGTREGVPRLLEMLDEAQVKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAAGLYGWDILLAGTAWPGKPIGRDLGHLMRQARDAG HEVGLHAWDHHGWQANAGRWSDAQLIEQIRRGVDTLSDILGEKIQCSAAAGWRADERVIEAKQTFGFRYNSDCRGQSLFRPLLADGSLGTPQIPVDLPTF DEVVGPHVAARDFNAFILDRFQSQALNVYTIHAEVEGILMAQDFRQLLADARQRHIDFKPLGDLLPEFFNTLPVGRVQRGVLEGREGWLGVQGA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site