Pseudomonas sp. GM30, PMI25_000941

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTATCTGCGCAAATTCAACGTCGACTTCCTGAAGATCGACCAGAGTTTCGTCGCGATGATCGGCATTGACGCGCTGTCGCGGCATATTCTGGACACCAT TATCGAACTCTCGGCCAAGCTCGATCTGGGTATTGTTGCCGAAGGTGTAGAAACTCCGGCACAGGCTGACTATCTGACCGCACACCACGTCAACTTCCTG CAGGGCTATCTGTTCGGAAAACCCATGCCCGGCGCCGACTTCATCGATGCATTAAGTCACCATTAACTAAAAATAAATTAAGCCCGGTGCTGCCACCCGA CGCACCAAATTGATACAAAACACCACTGTTGTTACATGACGACAAGATCAGGATTTACTCTTGGCGCATTAACTACTACAATTTTTTCAGCCTGTGCAAG ATTGGCAGGTGAGCCATTATCACCGAGTCGCTTCAAGGCTCTTGGCTTATAGCTTTGTTTGCGGTTGGTATCAGCCAAACACACTATTGGAGTAAAGATA
DNA Sequence for Gene
>PMI25_000941
TTGTCCAGACTCGCTGAATTTCGTGCAGCTGAAAAGGCCCTTCAGGAACAGCTCAAGCAGTTGGAATCGCTGAAGAACGATGCCGGGCTCAAGAAAGAAA TCGAATTCGAAGAAAAGCTCCAGGGGCTGATGAAAACCTACGGCAAAGGCCTGAAAGACATCATCGCCATCCTCGATCCGAACCCGTCCAAGTCCGGCTT GCAAGTATCTACCGCACCAAAAACCCGCCGCGCGCGCGTGGTCAAGGTTTACCACAACCCACACACCGGTGAACTGATCGAAACCAAGGGCGGTAACCAC CGTGGCCTGAAAGCCTGGAAGGAACAGTACGGTGCTGCCACCGTTGATTCCTGGTTGCGCGGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTTGCGTCAACAAACAAGCCCTGCATTATGCAGGGCTTTTTTTTTCGACAATATCTAACAAAAGCAACGATTTCCCCCACGCTAGTTATCAATCCGCTT TAACACCCACAAGCCGTGAGGCTAAACATTTTGCGCCGGGATGTTGCAGCCGCAACGATCACTAAACTTTGTGCTTAATTCCTTCGGGTATCTAAACCCG TCGCGGTGCAAACAGACGCTTAAAGTTTCAAGCTGTTTCTCACTGCGACTATTTCCTCGGCGCTCGCCTTATAAACCTCGACCTGACCCGCGTAAGAAAG TACATAGGCCTTATCCGCCGTAGCCGCAGCAACCAATGTTTGCGACAACACATGTCGACCGTTTTCGGTGATCGTGCAGGTGGTTTCCAGCGCTTCCAAA GAGCCGAGCGTCGTCGGGTGCACCTTGTTGCAAACACTTTGATAGCCGCCCTGGAAGAAGTCTTTCTGAATCGACTTGCGCATCTCCAGCAAAACGCCCG
Amino Acid Sequence
>transcriptional regulator
MSRLAEFRAAEKALQEQLKQLESLKNDAGLKKEIEFEEKLQGLMKTYGKGLKDIIAILDPNPSKSGLQVSTAPKTRRARVVKVYHNPHTGELIETKGGNH RGLKAWKEQYGAATVDSWLRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site