Pseudomonas sp. GM30, PMI25_000937

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGTTGCTCAAGCTTTGCCCGGTACAAGCTTATATCGACTGGATCACCGAGGCGGCGCTGGTACGCGGGCCGGTATTTCGCGGCGTTGACCGCTGGGGT CATCTGAGCGAGGAGGGCTTGCACGCCAACAGCATCATTCCGCTGCTGCGTCAGGCCCTGGAGCGCGCCGGCATCCCGGCCGAGCGTTACACCAGCCATT CCCTGCGCCGCGGCTTCGCCACGTGGGCGCATCAAAGCGGTTGGGATCTGAAATCGCTGATGAGTTACGTCGGCTGGAAGGATATGAAGTCAGCCATGCG CTATGTTGAAGCCAGCCCCTTTCACGGGATGGCGCGGATTACGGATAAGCCGGCTTCGTCGTAGATATGGTTTTCTTCTATTAATACAGTCTGCTAATAG CGAAAACAAATCAGCAGCATCAGGTTTGCCAATGAGCCATCCGCCGAGTGAGTGGGTAGGATTCACCCATCGAATTCACAACCCTGACGGAGAGTCATCA
DNA Sequence for Gene
>PMI25_000937
ATGCCTATCATCAACAGCCAAGTAAAACCGTTCAAAGCTACCGCGTTCAAAAACGGCGACTTCGTACAAGTCTCGGACGCTGACCTGAAAGGCAAATGGT CCGTAGTATTCTTCTACCCAGCCGACTTCACCTTCGTGTGCCCAACCGAGCTGGAAGACCTGGCCGACAACTACGCTGCGTTCCAGAAACTGGGCGTGGA AATCTACAGCGTTTCGACCGACACCCACTTTGCCCACGCTGCCTGGCACAACACTTCGCCAGCCATTGGCAAAATCGAATACACCATGATCGGCGACCCG ACCCACGTCATCTCCCGCAACTTCGACGTGCTGATCGAAGAAGCTGGCCTGGCTGACCGTGGCACCTTCGTGATCAACCCTGAAGGCCAGATCAAAATCG TTGAGCTGAACGATGGCGGCGTTGGCCGTGACGCTTCCGAGCTGCTGCGCAAGATCAAGGCTGCTCAGTACGTTGCTGCTCACCCAGGCGAAGTTTGCCC GGCCAAATGGAAAGAAGGCGAGGCCACTCTGGCTCCGTCCCTGGACCTGGTCGGCAAGATCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCTGTGACACGCAACGCAGGGCGGTACGCCGCACCTTCTTAAGTACGCTGCACCGCCCAATAAAAATGCCCGGGCGAGATTCGCTCGGGCTTTTTTTTC GCCTCAAACAAAGGAAATCGCCCGTATGTTGGACGCCAATCTTAAAGCCCAGTTGAAATCGTACCTGGAACGGGTCACCCAGCCGATCGAGATCGTTGCT TCCCTCGACGACGGTGCGAAATCCCGGGAAATGCTTGACCTGCTGAAAGACGTCGCCAGTCTTTCGAGCCAGATTACCCTGATCGACAGCGGCACCGATG CCCGCAAGCCGTCGTTCTCGATCAACCGCCCAGGTGCCGACATCAGCCTGCGTTTCGCCGGCATCCCGATGGGCCATGAATTCACATCGTTGGTGCTGGC CCTGTTGCAAGTCGGCGGCCACCCATCGAAAGCCAGTGCCGACGTGATCGAACAGATCCGCTCGCTCAAAGGTGAGTTCAACTTCGAAACCTACTTTTCG
Amino Acid Sequence
>alkyl hydroperoxide reductase subunit C
MPIINSQVKPFKATAFKNGDFVQVSDADLKGKWSVVFFYPADFTFVCPTELEDLADNYAAFQKLGVEIYSVSTDTHFAHAAWHNTSPAIGKIEYTMIGDP THVISRNFDVLIEEAGLADRGTFVINPEGQIKIVELNDGGVGRDASELLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVGKI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site