Pseudomonas sp. GM30, PMI25_002312

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGTATCAGCAAGCCAAAACCGCGATGTCGCTGATGACCAGGGCACAATCACCCACGCCATCGGCTGTCGCCTGGCTTCAGGCCAATGACAGCATCCGT ATTGCGCAAACCGTCAGGCGGCGCCGCCTCAGGGGCGGCAAGGCGCTCTACCTGGACGAATACACCATCACTGATCAGACCACCCGCAAAGTGCTGTGGT ACGCGCACTTTCTGTATTCGACCTCGTGGGTGCCGGACAAAGCCTTTCTTTCTGCCCGGCTGAAAACCCCGCAAGAGCAGCAGCTGGGATCCGAGGCCGA CAGCACTCGCGGGCTGAGCCGCGCCCAACGACTGGCCTATTACCGCAGCATGATCGGCGTGGAGCAGGCCCGGCAGCTGTTTTTCAGCGCAGGCTGAGGC ACCCGACGATGACCGTGCATGACGTCTCGCCAGCGTATGGGACGTCATGCGCGGCACGCTACTTGCTGGCACTTTTGCCAAAAGCCAGCGGATGCCGCCC
DNA Sequence for Gene
>PMI25_002312
ATGCTCCACTCCCATCTGACGACGCTCAACGCCGTCTCACTGGTGCTCAACACCTTCAAGGCCGAAGGCTTGTCGAGCGACGCGCTGCTGGCCGGCAGCG GCATCAGTGCCGCGGATCTGGCCCGTGCCGATACGCGCATCACCACCAATCAGGAAATGCAGGTCTGCGCCAACGCGGTCGCGCTCAAGCATGACATTGG CCTGGAGCTGGGCCGGCGGATGCACGTTTCCTGCTACGGCATCCTCGGTTACGCCCTGCTCACCAGTGCCACCTTAGGTGACGCTTTGCGCTTGGCGATT CGCTATCCGGCGCTGCTGGGAACACTTTTCGAACTGCGCCTGGAAGACGATGGCGAGCAGGTCTGGTTCGTCGCCGCCGATTACCGCGAGAGTCCGTCAA TGGCGGTGTTCAACGCGGAATTCTGCCTGGTGTCGTTGAAAGTCATCTGTGACGACCTGCTCGGGCATCCGCTGCCGTTGCTGGCGACACGCTTTGAACA TACCGCGCCGGATTATCGCGACAGCTACGCCGAACACTTCGACAGCCCGCTGCACTTCGCCGCCAAGGACAACGCCTTCGCCTTCGACCGGCGCTGGCTC GATCAACCATTGCCATTGGCCGACAGCATCACCCATCAGGCCATGGCCGACCGCTGCCGCAAACAGAACATCGAGTTCACCGGGCGGCAGGCATGGCTGG GGCGGATTCGTCAGCTGCTCAGTGCGCAGCTCAACGCCGCGCCGGGCCTGGAGGGGCTGGCCCAGCAGATGAAATGTTCGCCGCGCACCTTGCGCCGGCA CCTGAAGGACATGGGCAGCAGTTATCAGGAGCTGCTCGACGAACTGCGCTTCGAGCGCGCCAAGCAGATGCTGTGTGAGGATCAACTGCCGATCTACCGC ATCGCCGAGACCCTGGGTTTCAGCGAGACCGCGAGTTTCCGCCATGCGTTCGTGCGCTGGAGCGGCGTGGCGCCGAGTCAGTTTCGACCGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAACCCCCCTGTAGGAGTGAGCCTGCTCGCGATTGCCATCCAGCATTCAACATTTATGTTGGCTGAGAGACCGCCATCGCGAGCAGGCTCACTCCTACAA GGATCATGTATTGCCTGCCCATGACAGGTGCAAACCTGCGCCAACAAGGGGCGAATTGCGGTCAGAGCTTTTGGCCATATCGATCCCCTTTTGGCCTTTC CTGCCGTTCTCCGATTCGCCGCGCGCCGCAACACTGGGGGCAACCGAATCAGCCCCCTGCGGAGAACAACAAATGCTGACGATCTACTCTGACGATCACC ACCTGCACCACGGCCGCTGCGAACTCATCGACGGCCAGCTCAAGCCGTGCTTCGAAATGCCGTCACGTGCCGACCATGTGCTGCAACGAGTACAGCACCA GAACCTCGGCCCGGTAGAAGCACCGAAGGATTTCGGCCTGGAGCCGATCGCACGGATCCACAGCCGTGACTACCTCGACTTCTTCAAAGGTGCTTGGGCG
Amino Acid Sequence
>AraC family transcriptional regulator
MLHSHLTTLNAVSLVLNTFKAEGLSSDALLAGSGISAADLARADTRITTNQEMQVCANAVALKHDIGLELGRRMHVSCYGILGYALLTSATLGDALRLAI RYPALLGTLFELRLEDDGEQVWFVAADYRESPSMAVFNAEFCLVSLKVICDDLLGHPLPLLATRFEHTAPDYRDSYAEHFDSPLHFAAKDNAFAFDRRWL DQPLPLADSITHQAMADRCRKQNIEFTGRQAWLGRIRQLLSAQLNAAPGLEGLAQQMKCSPRTLRRHLKDMGSSYQELLDELRFERAKQMLCEDQLPIYR IAETLGFSETASFRHAFVRWSGVAPSQFRPH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site