Pseudomonas sp. GM30, PMI25_002209
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00028
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 1 | 104 | 8.3E-26 |
| SUPERFAMILY | SSF48452 | TPR-like | IPR011990 | Tetratricopeptide-like helical domain superfamily | 3 | 95 | 1.04E-13 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 50 | 83 | 0.079 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 16 | 49 | 0.27 |
| Pfam | PF14559 | Tetratricopeptide repeat | - | - | 27 | 81 | 9.1E-6 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.