Pseudomonas sp. GM30, PMI25_002207

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM30
GCF_000282275.2|latest
Locus Tag
PMI25_002207
Name
Replicon ctg6
Genomic location 104947 - 106257 (+ strand)

Cross-References

RefSeq WP_007960746.1
GI 495235976
INSDC EUB83546.1
NCBI Locus Tag PMI25_002207
UniParc UPI00026FFAAB
UniProtKB Acc W6VF83
UniProtKB ID W6VF83_9PSED
UniRef100 UniRef100_W6VF83
UniRef50 UniRef50_Q4KKR1
UniRef90 UniRef90_Q4KKR1

Product

Feature Type CDS
Coding Frame 1
Product Name
16S rRNA methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 0.94
Kyte-Doolittle Hydrophobicity Value -0.078
Molecular Weight (kDa) 47.2
Isoelectric Point (pI) 7.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000017 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI25_002207

Human Homologs

Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.3e-27
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.3e-27
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.3e-27
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.3e-27
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.3e-27
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.3e-27
Percent Identity: 31.4

References

No references are associated with this feature.