Strain | Pseudomonas sp. GM30 ctg7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCGCGCTTGATTTTCTCCAGTTCCGGCGTGCTGCCCAACGCTGCAATCACCCCCGGAATCTCATTGCCCTGCAACAGCACACAATCCACGTACGCGGTG GCGATCACCGTCGCGGTATCGATCAGTGTCGGTGGGCAATTATCGATGGCCGCGTCCATCACTGCGGTCTGGCGCGTATCGAAATCCCGGTAAAGCGCCG CGAGCAGGCCCGAGCGGGTGGTGAAGTGGTCGTAGACCACCGGTTTGGTCACCCCGGCCTTCTCCGCCAGATAACCCAAAGTCAGCGCATCGGTGCCCTC GGCGCGAATGATCTGCCAGGCAACATCGAGCAACTGGCGATTGCGATCTTCGCGCGACAGACGACGGCGCGGTTGGGCAGGGGAATCGGCTTCGGTCATT TCAGTGGTTGACATCGTTAATATACCAAACGTAACTTACTGTTCGTAACTTACCAAGAGTACATAGCCCTTGGTCAGCGCAAACTTACAGGAGAATTCCC
|
|
DNA Sequence for Gene |
>PMI25_002763
ATGCATGCATTGATTGTTGTGGCGCATCACGAGCCGCGTTCGCTGACCCACAGCGTGGCGACGCAGATTGCCCAAGGCTTGACCCGGGCCGATTCGGCCA ACACCCATGAGATCGCCGATCTGTACGCGGAGGGGTTTCAGCCGGTGTTCGGCGCGGCGGATTTCGCCGTGCATCACCGTGAAGCGCAGCCACCTGCCGA CGTGCTGGCGGAACAGGCACGGATTGATCGAGCCGACGCGCTGGTGCTGGTGTTCCCGGTGTACTGGTGGTCGATGCCGGCATTGCTCAAGGGCTGGATC GACCGGGTGTTCAGCAATGGCTGGGCGTTTGATTTCGCTGGCGACCTCAAGCATGTGAAGAAGCTGCAGCGCCTGCGCGTGCATCTGGTCGGCCTCGCCG GCGCGGATGAGCGCGCCTACGAGCGTCACGGTTATGGGCCGGCGATGAAGGCGCAGATCGAGCACGGGATTTTCGATTACTGCGGGGCGACGGTGGTCAG TTCGACGCTGATGGTGGAATCGGAAGTGCGTGATCCACAGGAACATCTGCAGACGGCACAGCACATCGGCGCCCAGATGTTCACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GTCGCACCCCTGTAGGAGCTGCCGAAGGCTGCGATCTGTTGATTTTTGAAAGCAAGATCAAAAGATCGCAGCGTGCCGCAGCCCCTACAGGTCAGCGGGC GCCGGGCCAGCCGGACTTGGCGAGGGCGGCGAGCAGCGTTTCTGAATCCAGCCCCGGCACCGCATGCCCGTTGCCCTCGGTGCTCTCGCTGGCGAGCAGG GCATTGATGATCGCTTCTTCCACCGCTTCGGTGGCGGCGAGGAACAGCTCACTGATGTGGTCGTTGTTGACCATGCGCAAGCTGTCGCAGGTCGGCGCGC CTTTGCCTTCGTAGGCGGCGGGCGGGATGTGTTGGTTGCCGGTGGCGAACGCGATGAAGATGTCGCCGCTGTGGTCTTCGTTACCACCGCCGCTGCGCGC CAGACCGAGGCTGGCGCGCTGTGCCAGGCGCGTGCATTGATGCGGCAGCAGTGGCGCATCGGTGGCAAGGCAGACCACGATCGAACCCATGCCCGGATGC
|
|
Amino Acid Sequence |
>NAD(P)H dehydrogenase
MHALIVVAHHEPRSLTHSVATQIAQGLTRADSANTHEIADLYAEGFQPVFGAADFAVHHREAQPPADVLAEQARIDRADALVLVFPVYWWSMPALLKGWI DRVFSNGWAFDFAGDLKHVKKLQRLRVHLVGLAGADERAYERHGYGPAMKAQIEHGIFDYCGATVVSSTLMVESEVRDPQEHLQTAQHIGAQMFT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|