Pseudomonas sp. GM30, PMI25_002611

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TAGCGCGCGCGAAAGGTCTTGAGGATCGGCGGCAGCAGGTTGCCGGCAAACGACGGCATCGCCGCCAGCGTCACCCGCCCGCGTTGCAGGCTGAAGCGCT GACGCATTTCGTCTTCAGCGTTGTCCCAGTCGGCGATCAGACGCCGGGCCAGCGGCAGCAACGATTCGCCCTCGGCAGTCAGTGCCACGTTGCGCGTGTT GCGACTGAACAGCCGCCCGCCGAGGCCCTCCTCCAGCGCCTTGATGGTCAGGCTCAGCGCCGATTGCGACAGGTGCAAGCGCTCACAGGCCACGGCGAAG CTCAGGCTCTGGGCCACAGCGAGGAAAGCACGGATCTGTTTGATGGTCATGAGCGCTATGCTTCCGTATCTGCAATCAGTCAATTGTTGAGCTTTATCAA TCAATCAACCTTAAAAATCAACTTAACAAATATATCCTCCAGCGCGACACTCCAGTCATTCGGCTAGCCAGCCGCCCGACCAACAATAAAAGAGGTGCAT
DNA Sequence for Gene
>PMI25_002611
ATGGCAGGTTTCGACAAGCGCGTGAGTTCCTACGAGGAAGCTCTGGCCGGTCTCGAAGACGGCATGACCGTGATCGCCGGCGGCTTCGGCCTGTGCGGCA TCCCGGAAAACCTGATCGCCGAGATCAAGCGCAAGGGCACCCGCGACCTCACCGTGGTTTCCAACAACTGCGGCGTCGACGGTTTCGGCCTCGGTGTGCT GCTGACCGACCGCCAGATCAGCAAGGTGATTGCCTCCTACGTCGGCGAAAACAAACTGTTCGAAGAGCAACTGCTCAAGGGCGACATTGAAGTCATCCTG ACCCCGCAAGGCACCCTCGCCGAGAAAATGCGCGCAGGCGGTGCCGGCATCCCGGCCTTCTTCACCGCCACCGGCGTCGGCACCCCGGTCGCCGAAGGCA AGGAAGTGCGTGAATTCAATGGGCGCAAGTACCTGATGGAAGAGTCCATCACCGGCGACTTCGCCATCGTCAAAGGCTGGAAAGCCGACCATTTCGGCAA CGTCATCTACCGTCACACCGCGCAGAACTTCAACCCGCTGGCCGCCACCGCCGGCAAGATCACCGTGGTGGAAGTCGAAGAAATCGTCGAGCCCGGCGAG CTGGATCCGTCGCAGATCCACACCCCTGGCATCTACGTCGACCGGGTCATTTGCGGCACGTTCGAAAAGCGCATCGAACAGCGCACCATCCGCAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAGGCTGACGGAGAATAACAACATGGCACTTACCCGCGAACAAATGGCTCAGCGCGTCGCCCGCGAAATGCAGGACGGCTACTACGTGAACCTCGGCA TCGGCATTCCGACCCTGGTCGCCAACTACATTCCCGAAGGCATGGAAGTCATGCTGCAATCGGAAAACGGCCTGCTCGGCATGGGCCCGTTTCCGACTGA GGACACGATCGATGCCGACATGATCAACGCCGGCAAACAGACCGTCACCGCGCGCATCGGCGCATCGATTTTCAACTCCGCCGAATCCTTCGCAATGATT CGCGGCGGGCATGTCGACCTGACCGTGCTCGGCGCGTTCGAAGTCGACGTCGAAGGCAACATCGCTTCGTGGATGATTCCCGGCAAACTGGTCAAGGGCA TGGGCGGCGCGATGGATCTGGTGGCCGGCGCCGACAACATCATCGTGATCATGACCCACGCCTCCAAAGACGGTGAGTCCAAACTGTTGGCCAAGTGCAG
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MAGFDKRVSSYEEALAGLEDGMTVIAGGFGLCGIPENLIAEIKRKGTRDLTVVSNNCGVDGFGLGVLLTDRQISKVIASYVGENKLFEEQLLKGDIEVIL TPQGTLAEKMRAGGAGIPAFFTATGVGTPVAEGKEVREFNGRKYLMEESITGDFAIVKGWKADHFGNVIYRHTAQNFNPLAATAGKITVVEVEEIVEPGE LDPSQIHTPGIYVDRVICGTFEKRIEQRTIRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site