Pseudomonas sp. GM30, PMI25_002946

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCGATGGCGTAACGGGCGACACTGCCATCGGGACGGTTGAAGGAGAAACTGCAGTGACCGGCTGTGGCGTCGACTTGCAGCAGTGATCCTCTGGACGCT TGCAGGTGAGCCGCCAATAGGGGTTCGGCGCTGTCTTCGAACAGAGCTTGCAGAAGGTTTTGCGCCTGGTCGTGTGCAGCACCCAGGCGTGAATGTGTCT GGGGCGTGAGGTAGCAGGTCTCCACTGACGTCGAAGCGTCAAGGACGGCGCGCAGGGCGGTGATCATTGCGCGGTATTCGCTCTGTTGGGCAGTATGGCG TTGCAGCGTGGCGGAAGGTGACTGCATGGAAAACGACTCTGGAATGATTGAAAGCCGTCAGTGTCGAAGCATGGCGAACAGCGGGTGCGGTACATACGTA TCGCCGGTTGAAAATGTCCTGGCTTGCTGGAAGGGGTCGCTCCCTGGTCTGGCTCTGGCGGTCTCCCCTTGAAGATGACAGTGCGTGCGCAAAGGACCTC
DNA Sequence for Gene
>PMI25_002946
ATGAAGCAAAAAAGGACTCTCGGAACGCCACGGTTGTTGGGCATCGTCTGGCCATTTATTGCCGTCGTGTTATTTCAGGCGTTATTGGGGGGCGTGAGTC TTTACGTCCTGTCGGCCGTGCGCGGCTATGTTGCCGGCGAGAGTCTCTGGTCCAAGGGCCAGAAGGACGCCATCTATTACCTGAACCTGTATGCCGACAG CCGCGACGAGGCGATCTTTCTCAAATACAAGGAAGCGATCGCCGTGCCCCAGGGCGGTCACCAGTTGCGTCTGGCGCTGGATCGTCAGCCGCCGGATCTG CAGGCGGCACGGGAGGGGATTCTCAAGGGCGGCAACCATCCCGATGATGTGTCGAGCCTGATCTGGCTGTACCTCAATTTTCGTCATTTCAGTTATCTGG AAACCGCGATCGACCGCTGGACCATCGGCGACGCCTATCTGGTGCAACTGGACAATGTCGCGCGCGAGATGCATCAGCGCATCAGCGAAAACATCGCGAC GCCGGCTGATATTCAGCACTGGAAAGCGCGGATCTTTGCCATCAACGACGGTGTGACGCCGGCGGCCAAGGCGTTCAGCGATGCCTTGGGCGAAGGTTCG CGGATGATCCTGCGCCTGCTGCTGTTCACCAACCTGGCCACAGCGCTGGGGTTGATCGTGCTGGCCCTGTTGCGCACCCACAAACTGCTCAAGCAGCGGC ATGCCTTTGCTCAGGCGTTGCAGTTGGAGAAGGATCGGGCACACATCACCCTGCAATCGATTGGCGACGGGGTGATCACTACCGACGTCAACGGCGCGAT CGATTACATGAACCCGGCGGCGGAGGCCATGACGCACTGGAAGTCCGAGCACGCGGCGGGTCTTCCGTTGGCGGCGTTGTTCAATCTCTTGGATGACAAC GCCCAGGCCGAAGGGCTGACGCTGATCGAGCATATTCTCAGTGGGCAACTGGTCGGTGGCAGCGAACACTCCAAGCTGATCCAGCGTCTGGATGGCAGCA CGGTCTCGGTGACGCTGGTAGGCGCGCCGATCCGCAATGCCGAGAAGGTCATTGGGACGGTGCTGGTGCTGCATGACATGACTCAGGAACGGCAATACAT CGCCAACCTGTCGTGGCAGGCGACCCACGATGCCCTGACCGGTCTGGCCAATCGCCGCGAATTCGAATATCGCCTGGAGCAGGCGTTGCACAACCTGACG CGTCAGCCCGGTCGGCATGCGCTGATGTTTCTCGATCTGGATCAGTTCAAACTGGTCAACGACACCTGCGGTCACGCCGCCGGCGATGAGTTGCTGCGGC ACATCTGCACGCTGTTGCAATCGGGCTTGCGCGAGAGCGACACCCTGGCGCGGCTGGGCGGTGACGAGTTCGGCATTCTGCTGGAGAACTGCGCCCCGGA TGCCGCCGAGAAAATCGCCGAGAGCCTGCGCCAGACCGTGCAGAACCTGCACTTCGTGTGGAAGGGGCGGCCGTTCCTGACCACTGTGAGCATCGGCCTG GTGCACATCGCCCAGACCCCGACCACCCTCGAAGCCTCATTGCGCGCCGCCGACATGGCTTGCTACATGGCCAAGGAAAAGGGCCGCAACCGGGTGCAGG TCTACCATGCCGACGACTCCGAACTGTCGCTGCGTTTCGGCGAAATGGCCTGGGTGCAGCGCCTGCACATGGCGCTGGAAGAAAACCGCTTCTGCCTCTA TGCCCAGGAAATTGCTCCGCTGGGCGCTACAGCCCATGGCGGCGGGCACATCGAGATACTCTTGCGTCTGCATGATGAAGCCGGACGGATGATCCTGCCG GACAGTTTCATTCCGGCGGCAGAACGTTATGGCCTGATGAGTCAACTGGATCGTTGGGTGGTCGAGAATGTTTTTAAAGTGATTGCCCAATGCATCGCCG AACAACATGAAGGTCCGTTGGCAATGTGTGCGATTAATCTTTCAGGCATTACTATCGGAGATGACGCGTTCTTGCACTTTCTGCGTGAACAGTTTGTTAG TTACTCGATACCCCCTGAAATGATTTGTTTTGAAATTACTGAAACCAGTGCTATTGCCAACCTGGGCAGCGCAATCCGATTTATTAATGAACTCAAAGGC TTAGGTTGTTACTTCTCACTTGATGACTTTTGTGCCGGAATGTCTTCATTCGCTTATTTGAAACATTTGCCTGTAGACTTCCTGAAGATCGACGGGAGTT TCGTAAAGGATATGCTGGACGACCCGATTAACCGCGCTATGGTCGAGGTGATCAATCACATCGGGCATGTCATGGGTAAGCAGACAATTGCCGAGTTTGT AGAAACAACTCAGATCGAGAAGGCATTGCTTGAAATCGGGGTGGATTACGCTCAGGGTTATGTCATCGAACGCCCGCAGTTGTTTACCTGCGACAGTTTG CAAAGTCGGCCCGCCAGACCGCAGCCGCTGTTGTTCAAGGCGCCTGGCACGTTCCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGCTCTTGCCGATCCTTACAATCACAAATCAAAAGGAGCCGAACAGTGATCGACACATTCAACCGAACCGGACCACTCATGGAAGCTGCAAGTTATCCT GCCTGGGCACAACAGCTCATAACGGATTGCAGCGAGAGCAAGCGCCGGGTTGTCGAACATGAACTGTATATGCGCATGCGTGATAACAAGCTCAGCGCCA AAACCATGCGTCAGTACCTGATCGGGGGCTGGCCAGTGGTTGAACAGTTTGCGTTGTATATGGCGCAGAACCTGACCAAGACCAAGTTCGCCCGCCATCC TGGGGAGGATATGGCGCGCCGCTGGTTGATGCGCAACATCCGCGTCGAACTCAATCACGCCGACTACTGGCTGAACTGGAGCCGCGCGCATGGCGTCAGC CTGGAGGATCTGCAGGCCCAGCAAGTACCGCCGGAACTGCATGCGCTGAGTCACTGGTGCTGGCACACGAGTTCGGCGGATTCGCTGATCGTCGCCATCG
Amino Acid Sequence
>membrane protein
MKQKRTLGTPRLLGIVWPFIAVVLFQALLGGVSLYVLSAVRGYVAGESLWSKGQKDAIYYLNLYADSRDEAIFLKYKEAIAVPQGGHQLRLALDRQPPDL QAAREGILKGGNHPDDVSSLIWLYLNFRHFSYLETAIDRWTIGDAYLVQLDNVAREMHQRISENIATPADIQHWKARIFAINDGVTPAAKAFSDALGEGS RMILRLLLFTNLATALGLIVLALLRTHKLLKQRHAFAQALQLEKDRAHITLQSIGDGVITTDVNGAIDYMNPAAEAMTHWKSEHAAGLPLAALFNLLDDN AQAEGLTLIEHILSGQLVGGSEHSKLIQRLDGSTVSVTLVGAPIRNAEKVIGTVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEYRLEQALHNLT RQPGRHALMFLDLDQFKLVNDTCGHAAGDELLRHICTLLQSGLRESDTLARLGGDEFGILLENCAPDAAEKIAESLRQTVQNLHFVWKGRPFLTTVSIGL VHIAQTPTTLEASLRAADMACYMAKEKGRNRVQVYHADDSELSLRFGEMAWVQRLHMALEENRFCLYAQEIAPLGATAHGGGHIEILLRLHDEAGRMILP DSFIPAAERYGLMSQLDRWVVENVFKVIAQCIAEQHEGPLAMCAINLSGITIGDDAFLHFLREQFVSYSIPPEMICFEITETSAIANLGSAIRFINELKG LGCYFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEVINHIGHVMGKQTIAEFVETTQIEKALLEIGVDYAQGYVIERPQLFTCDSL QSRPARPQPLLFKAPGTFR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site