Pseudomonas sp. GM30, PMI25_002938

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACTGAAAAAGGCATCGTCGAGCGCCCGGATACGGCGAAAATGGCCCAGTTGATGTGCCGCAAACGCCTGCATTGATTGGCTTGATGTCTGCGTTGTCCT CTTCGCGAGCAAGCTCGCTCCCACAGGTTTTGTGAATGCCACAGAACATTGTGGGAGCGAGCTTGCTCGCGAAGGGGCCCTAAAAGTCAATAAACATCCA CAAATCAGCCCCAAAATCTGCATTCAAAGAAGCTCTGAGCCTCTCTCGTCCCCTTTACGCCTGTCACCGGTCAACTAACTATGCTCCATGCGCATCTGGG GGATAGGTGCGTGGCGGCTCTTGTGATAACATCCGGCGTTTTCCGAGGCAGCTTCACGGAGCTGTCTTTACTGCGCAAATCACGGTCCGACTTGTTGATT TGTCGTAAGTCGGCGCACGGCACTCAGCCTGCCCCGACGAGCTTCGTACATCCCATATGGATATGACGAAGTTTCACCAGAAAAAGGAATCAGGCTTCTC
DNA Sequence for Gene
>PMI25_002938
ATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTCGACTACGCGATGAGCGTAATCGTCGGCCGTGCAC TGCCGGATGCGCGCGATGGCCTCAAGCCCGTGCACCGTCGCGTACTGTTCGCGATGAGCGAGCTGGGCAACGACTTCAACAAGCCGTACAAGAAATCTGC CCGTGTTGTCGGTGACGTGATCGGTAAGTACCACCCGCACGGTGATACCGCGGTGTACGACACCATTGTCCGCATGGCCCAGCCTTTCTCCCTGCGCTAC CTGCTGGTAGACGGTCAGGGCAACTTCGGTTCGGTGGACGGCGACAACGCCGCGGCCATGCGATACACCGAAGTGCGCATGACCAAGCTGGCGCACGAGC TGCTGGCCGACCTGCACAAGGAAACCGTGGACTGGGTGCCGAACTACGATGGCACCGAAATGATCCCGGCGGTGATGCCGACGCGCATCCCGAACCTGCT GGTCAACGGTTCCAGCGGTATCGCCGTGGGCATGGCGACCAACATTCCGCCGCACAACCTCGGTGAAGTCATCGACGGTTGCCTGGCCCTCATCGACAAC CCCGAGCTGACCGTCGATGAGCTGATGCAATACATCCCCGGTCCGGACTTTCCGACGGCTGCGATCATCAACGGTCGTGCCGGCATCATCGAAGCCTACC GCACCGGTCGCGGCCGCATTTACATGCGTGCGCGCTCGATCATCGAAGACATCGACAAGGTCGGTGGCCGTCAGCAGATCGTCATCACCGAACTCCCGTA TCAGCTGAACAAGGCGCGTCTGATCGAGAAGATCGCCGAGCTGGTCAAAGAGAAGAAGCTCGAAGGCATCACCGAGCTGCGCGACGAGTCCGACAAGGAC GGTATGCGCGTCGTGATCGAACTGCGTCGCGGCGAAGTGCCTGAGGTGATCCTCAACAATCTCTACGCCCAGACCCAGCTGCAATCGGTATTCGGCATCA ACATCGTCGCGCTGATCGACGGCCGTCCGCGCATCCTCAACCTCAAGGATCTGCTGGAAGCCTTCGTTCGTCACCGTCGCGAAGTGGTTACCCGTCGTAC CGTGTTCGAGCTGCGCAAGGCTCGCGAGCGTGGTCACATCCTTGAAGGCCAGGCCGTTGCCCTGTCGAACATCGATCCGGTGATCGCCCTGATCAAGGCT TCGCCGACCCCGTCGGAAGCGAAAGAAGCGCTGGTCAGCACCCCTTGGGAATCCTCGGCGGTGGTGGCGATGGTGGAACGCGCCGGTGCCGACTCGTGCC GTCCGGAAAACCTCGATCCGCAATACGGTCTGCGCGAAGGCAAATACTTCCTGTCGCCAGAACAGGCGCAAGCCATTCTCGAGCTGCGCCTGCACCGTCT GACCGGTCTGGAGCATGAGAAGCTGCTGGCCGAGTATCAGGAGATCCTCAACCAGATCGGCGAGCTGATCCGCATCCTCAACAGCGCCGTGCGCCTGATG GAAGTGATCCGCGAAGAGCTGGAAGTGATCCGTGCCGAATACGGCGACGTACGTCGCACCGAGATTCTCGATGCGCGTCTCGATCTGACCCTGGGTGACA TGATCCCGGAAGAAGAGCGCGTTGTGACCATCTCCCACGGTGGCTACGCCAAGACTCAGCCACTGGCTGCTTACCAGGCTCAGCGCCGTGGCGGCAAAGG CAAATCGGCGACCGGCGTCAAGGATGAGGACTACATCGCTCACCTGCTGGTGGCCAACAGCCACACCACGCTGCTGCTGTTCTCCAGCAAAGGCAAGGTG TACTGGCTGAAGACTTACGAAATTCCGGAAGCGTCCCGTGCCGCCCGTGGTCGCCCGCTGGTCAACCTGCTGCCGCTGGATGACGGTGAATACATCACCA CCATGCTGCCGGTCGAGGAATACACCGAAGGTCACTACATCTTCATGGCGACCGCCAACGGCACCGTCAAGAAGACCCCGCTGGAATCCTTCAGCCGTCA GCGCAGCGTCGGTCTGATCGCGCTGGAGCTGGACGAAGGCGACGTGCTGATCTCTGCGGCCATCACCGATGGCGAGCGCGAAGTGATGCTGTTCTCCGAC GGCGGCAAAGTCACGCGCTTCAAAGAGTCCGACGTGCGTGCCATGGGTCGTACCGCACGTGGTGTGCGCGGCATGCGTCTGCCGGAAGGGCAGAAGCTGA TTTCGATGCTGATCCCGGAAGAAGGCAGCCAGATCCTCACCGCTTCCGAGCGTGGTTATGGCAAGCGCACCGCGATCACCGAGTTCCCTGAGTACAAGCG CGGCGGCCAGGGCGTGATCGCCATGGTCAGCAACGAGCGTAACGGTCGTCTGGTCGGTGCGGTTCAGGTGCTCGACGGCGAAGAAATCATGCTGATTTCC GATCAGGGCACGCTGGTGCGCACGCGGGTCGACGAAGTGTCGAGCCTGGGTCGTAACACGCAGGGCGTGACCCTGATCAAACTGGCCAAGGATGAAACCC TGGTCGGTCTGGAGCGGGTTCAGGAGCCGTCGGAAGTCGAAGGCGAAGAGCTTGAAGGTGAAGAGGGTGCCGAGTTCGAGGGGGATGTCGTGATCGACGA CGTTGCCGAGGACCAGCAACTCGACGCCGCAGCTGACGAAGAGCCGCAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGACAAGCGAGGGGGCGGATGAAAATTCGCCCCCTTGTTATTTGTCCGGAATGAAATATCGGCGCCCATGACGAGCCATGTGGGAGCGAGCTTGCTCG CGAAAGCGGAGTATCAGGCGACATTGTTGTTGAATGTCAGTCCGCCTTCGCGAGCGAGCTCGCTCCCACACAAGATTGGCGCCGACTGATATGTGATACC ACCAAATCAGAGCGAGATTGGATGTGAGCAAGCGAGCCTATAACTTCTGTGCCGGTCCTGCGGCGCTTCCTGAAGCTGTCCTGCAACGTGCCCAGGGTGA ACTCCTTGATTGGCATGGCAAGGGTCTGTCGGTCATGGAAATGAGCCATCGCAGTGATGAGTTCGTGTCCATCGCCACCCAGGCCGAGCAGGATCTGCGT GACCTGCTGAATATCCCGTCGAACTATAAAGTGCTGTTTCTGCAAGGTGGCGCCAGCCAGCAATTCGCGCAGATCCCGCTGAACCTGTTGCCGGAAAACG
Amino Acid Sequence
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY LLVDGQGNFGSVDGDNAAAMRYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN PELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRIYMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRREVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKA SPTPSEAKEALVSTPWESSAVVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQEILNQIGELIRILNSAVRLM EVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSD GGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAITEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEEIMLIS DQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDETLVGLERVQEPSEVEGEELEGEEGAEFEGDVVIDDVAEDQQLDAAADEEPQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site