Pseudomonas sp. GM30, PMI25_002803

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGATAACTGACCTTGATCTGACCGCTGGCCGAGGCCGGGACTTTCACCTCCAGCCCTTGGCGATACACCGGTTGTTCACCGAAGAATTCGTCACTGTGCG ACTCGCCCTTGGGCAACGCCGGCTGCTGCTCTGCCGTCAAACCGTCGAATTTCAGGCGTTTCTGGTACAGGTAATAGCCGTCGGTGATTTGCCAGAACAG CTGGGTTTCCCCGGACTCAAGGCGTTCGGAGGTGAGCACGAAGGCTTTGTCGACCGGCAGAAACTCCGGTTTGGTCTCGAATGGGTTGTTTCCCGCCTGG GCCAGGCCGGAGATCAGCAGTGCAAACAAAAGAAAAAAATGACGCATGGAGGAGCCTTGTCCCTGTGCAAGTGTGGGCACAATGGTGGATGGCGATTAAC CGATGATTAACCGTCACGCCCTTGTCGCTGTGGCGTTGGGCGCCATAATGTCAGCTTAATCGGCCAACGGCCTAATCGGCTTTTTTCTACGGGACGGATC
DNA Sequence for Gene
>PMI25_002803
ATGCACGTACTGGTTTGCGAAGACGATGAACTGATCGCCAGCGGTATCGTTGCCGGTCTCACGGCGCAGGGCCTGACGGTCGAGCACGTCAACACCGCCT CGAAAGCACGGGCGATGCTCAAGGTCGCCGAATTCGACGTGATGGTGCTCGATCTCGGCCTGCCTGACGAAGATGGCCTCAAGTTGCTGCAACAACTGCG TCAGCAGGGCCTGGAAATTCCGGTGCTGATCCTGACCGCACGCGATTCGGTGACCGACCGGGTCGATGGCTTGCAGGCCGGGGCCGATGACTATCTGCTT AAACCGTTCGATCTGCGTGAGCTGTTCGCCCGTCTGCAAACTCTATTGCGCCGGGTCGCCGGACGCAGCGTCAACCTGATCGAACACGGCGCGCTGACCT ACGACCCGAGCAGCCGTGAAACGACTCTGGCCGGGCAACCGGTGGACCTGTCGCGGCGCGAGCAGTCGCTGTTGCAGGCGCTGTTGCACAATCGTGGCCG GGTGCTGTCCACCGAGCAGTTGAAGGACAGCGTCTACGGCTTCAACGACGAGTTGGAGAGCAACGCGCTGAACGTGCATATCCATCACCTGCGCAGCAAA CTCGGCAAGGGCATCGTTGAAACCGTGCGCGGTCTGGGCTATCGCCTCGGGCCGGCCGATGGTGGAGAACAACAGAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGTCTGCGTCTGCGCCTGAGTCTGACCCTCGGCGCCGCGTTCGCCCTGATCTGGGCGCTGGCTGCGGCGTGGATGCTCAGCGACTTGCGCAATCAGAT GATGTTTTCCCTCGACCAGCGGCTGGTGGCTTCGGCGCGCATGGTCGCCGGGCTGCTGGAGCAACTGCCAGCGTTGCCGAGCAAGGGCGAGGGCACCCAT TTCAGCGCCGAACAATTGAACATTCCCGGTGGCATGGCCTGTCAGGTCAGCTCGTTGCGCGGGGAAATCCTGGCCCGCAGCCACAGCAGCCCCGAGCAAA CCCTGGAAGCGGAAAAAATGGGCTTCCATGACCAGATGATCGATGGCGCGCCGTGGCGCAGTTTTACGCTCGCGCGAGGCGATGTGCGGATCACCACTGC CGACCGGCAGATCGAGCGCGAAGCGCTGAACATGTCAATCCTGCTGGCGGCTTCGGTGCCGGTTGGCGTGGCGTTGCTCGGTTGCCTGTGCCTGTTGTGG
Amino Acid Sequence
>transcriptional regulator
MHVLVCEDDELIASGIVAGLTAQGLTVEHVNTASKARAMLKVAEFDVMVLDLGLPDEDGLKLLQQLRQQGLEIPVLILTARDSVTDRVDGLQAGADDYLL KPFDLRELFARLQTLLRRVAGRSVNLIEHGALTYDPSSRETTLAGQPVDLSRREQSLLQALLHNRGRVLSTEQLKDSVYGFNDELESNALNVHIHHLRSK LGKGIVETVRGLGYRLGPADGGEQQK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site