Pseudomonas sp. GM30, PMI25_003291

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM30 ctg9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACCGCGCACGCCCAGGCGTCGATCGCTTTGCGCGGCGACCAGCAGGGCGTCGATGACTTTCAGGCGAATCAGGCTGGTGCGCAGGCCGAAGCTTTTCAG CAGCAGGCGAATGCGCTCATTACCCAGGCGTTCGGGGCTGGGGGCGAAACTGCTCGCGCGGGAACTCATGGCAGCTCCTTGTGACGCCTGGCTACCGTCC GTTGGTAGTTGCGAGTTGTACATGGGGTTACTCCTTTTCAGAGCCCGATCAGGAAACGTTTTGACTGCTCTCAGTAAACAAGACGTTTCAGCACGACAAA TCATGAAAGGAAATATGTAGAAATTTTGTCGGTTATTCGTTGTTTTCCCGTAATCAGTGGATTGCACCCTCGTCAATCGGGCTAAATTTTTTTTCCCGCA TTCGTTTCCTGAACAGCCGTCTTGCGCCCAGGCGCATGAATCAATTTCAGAGCGGATCCGGCGCAAGCGCCGATCCTTGTCTTGTCGTTCAGGAGCGAGT
DNA Sequence for Gene
>PMI25_003291
GTGATTATTTCCCGACAGTTAACCGGACTGGCCCTCGCCGGTGCGTTTCTCGGACTCAGTCTGTCCGCCCATGCCTTCAGTCCCGCAGCACAGGCCAGTG CCGATATCCGTCGCACCTCCTTTGGTGTGCCGCACATCCGCGCCGAGAACGAGCGCGGTCTGGGTTTCGGCATCGGTTACGCCTACGCGCAGGACAACCT GTGTCTGCTGGCCAACGAGATCGTCACGGTCAATGGCCAGCGCTCGCGCTATTTCGGGCCGGAGCAGTTCACTGTCGAACAGCGCGAGAATCGCGTCAGC GATCTGTTCTTCACCTGGCTCAACACTCCCGAAGCAGTGAAAGCCTTCTGGGACGCGCAACCGGCGCAGGTGCACGATCTGGTAGAAGGTTACGCAGCGG GTTACAACCGCTATCTGGCCGAGCGCCGCCAGCAGGGGCTGCCGCAACAGTGCCAGGGGGAATGGGTGCGTGATATCGCCGCCGAGGATCTGGTGAAACT CACTCGACGCCTGCTGGTCGAGGGCGGTGTCGGGCAGTTCGCCGAAGCCCTGGCAGGCGCGACGCCGCCCCAGGCCACGGCGCAGCTCGGCAGCAATGCG CAGGCCTATCAGTTGGCGGATGCGCGCCTGCAGCGCTTCGCCCTGGATCGCGGCAGCAACGCCGTGGCGGTCGGCAGCGAACGCTCGTTCAACGGACGCG GCATGCTGCTGGCCAACCCGCATTTTCCATGGGTCGGCGGCATGCGCTTTTACCAGATGCACCTGACCATTCCGGGCAAACTCGACGTCATGGGCGCAGC CTTGCCGGGGCTGCCGATGATCAACATCGGTTTCAATCAGCATCTGGCCTGGACCCACACGGTGGATTCGTCCAAGCACTTCACCCTGTATCGCCTGCAA CTCGATCCGAAAGACCCGACCCGCTACCTGCTCGACGGCAAGTCGCTACCGTTGAACAAGCAGACCGTTACCGTGCAGGTCAAACAGGCGGACGGCCAAG TGGTGCCGGTCTCGCGCGATGTCTACAGCTCGCAGTTCGGCCCGATCGTGCAATGGCCGGGCAAGCTCGACTGGGATCATCAGTACGCCTACAGCCTGCG CGACGCCAACCTGGACAATGACCGCGTGCTGACGCAGTGGTACGCGATGAACCAGGCGTCGAGCCTCAAGGATCTGCAGGTTTCGGTGCACAAGCTTCAG GGCATCCCCTGGGTCAACACCCTGGCCGTGGATGACAAGGGGCAGACGCTGTACATGAACCTGTCGGTGGTGCCGAACGTCAGCGCCGACAAACTGGCCA AGTGCAGCGACCCGCGCATCGGTTTGCAGATGATCGTGCTCGACGGTTCCAACAGCGCTTGCGCCTGGGACATCGATCCGCAAGCTGCGCAAAAGGGCAT TTATGCCGCCAGCCAGCTGCCGCAACTGTTGCGCGAGGACTTCGTCCAGCACTCCAACGATTCAGCGTGGCTGGCGAACCCGGCACAACCGCTGACCGGA TTCTCGCCGCTGATCAGTCAGGACGGTCAGCCACTGGGCCTGCGTGCGCGCTTTGCGCTGGAGCGTCTGAGTGCTCTGGGCAAAAAAGGCCCGCTGGCGA TGAAGGATCTGCAACAGATGGTGATGGACGACAACGTCTATCTGGCGACTCAGGTGCTGCCCGATCTGCTGAAGTTCTGCGCTGCGGATCTGGGTGCGGA CGCGGCCGCGTTGAAGCCGGTTTGCGTCAGTCTCAAGGGTTGGGATGGCCGGGCGAATCTGGATTCGGGCATTGGCCTGGTGCATTTCCAGAACATCATG CAGGCGCTGCAAGCGTCGCCTGATGTCTGGCGCGTACCGTTCGATCCAAAAGACCCGCAACACACGCCACGCGGTCTGGCGATCGAGCAACCGGCGGTGA GCAAGGCACTGCGTGAAGCGCTGCTGGCGTCGGCCGCCACGGCACAGAAAATGGGCCTCAAGCCTGAAACCCGCTGGGGCGATATTCAGGTGGTGAGCAG CGGCGCTCGACAAACTGCGATTCACGGCGGCCCGGGAACGCTGGGGATCTACAACGCGATCCAGAGTGTGCCGCGTGAAGACGGCAAACTCGAAGTGGTC AGCGGCACCAGCTATCTGCAAGTGGTGACCTTCGACGACAAAGGCCCGCACGCTCAAGGGCTGCTGGCGTTCTCGCTGTCGAGTGACCCGGAGTCGAAAT ACTCTCGCGATCAGACCGAGGCATTTTCGAAAAAACAGTGGAGTGTGCTGCCGTTCACTGAGCAGCAGATCGCAGCTGATCCGCAGTATCAGCTGCAAAC CGTTCGCGAGGTGGCGGGCAAGAGCGCCGAGGTGGTTGCGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCAGCCTGAACGAAAAAGCCGCTGCTCCCTGAACGGGGACAGCGGCTTTTTTTGCTTGTGTGTCTCAACTCTTCGGTGGCTGCCGCGGCATCGAGTTGA TCACCGGATCACCCTCGGTATTGCGCGTCAGGTAGACCGGCAGCACCTTGGGCAGGGTGTTGACGAGGCCGCCGAGTTCTTTGATGTTGTAGACGCCGCC GACGCGGATCGTGCCGGTGTTGGCGTCGGCCAGTTTCAGCGGTTTGCTCAGGTAGCGATTGATCAGCGGCAAGGCGTCGTTGAGTGCCAGGTTGTCGAGC ACCAGTTTGCCGTTGCGCCAGGCCAGGGCGTTGTCGTTGGCGTAGGTCTGGCTGATCTGCGGCATGTAGTCGCCATGCCGGTACTGCGCCTGCATGGCCG GCCCCAGGCGCAGACCGTCGCCGGGCAGGGCGGCGTTGCTGGTCACCAGCACCGAGCCTTCGATCAGATTGACCCGCACCTGATCTTCGTAGAGCCAGAC
Amino Acid Sequence
>acyl-homoserine lactone acylase subunit beta
MIISRQLTGLALAGAFLGLSLSAHAFSPAAQASADIRRTSFGVPHIRAENERGLGFGIGYAYAQDNLCLLANEIVTVNGQRSRYFGPEQFTVEQRENRVS DLFFTWLNTPEAVKAFWDAQPAQVHDLVEGYAAGYNRYLAERRQQGLPQQCQGEWVRDIAAEDLVKLTRRLLVEGGVGQFAEALAGATPPQATAQLGSNA QAYQLADARLQRFALDRGSNAVAVGSERSFNGRGMLLANPHFPWVGGMRFYQMHLTIPGKLDVMGAALPGLPMINIGFNQHLAWTHTVDSSKHFTLYRLQ LDPKDPTRYLLDGKSLPLNKQTVTVQVKQADGQVVPVSRDVYSSQFGPIVQWPGKLDWDHQYAYSLRDANLDNDRVLTQWYAMNQASSLKDLQVSVHKLQ GIPWVNTLAVDDKGQTLYMNLSVVPNVSADKLAKCSDPRIGLQMIVLDGSNSACAWDIDPQAAQKGIYAASQLPQLLREDFVQHSNDSAWLANPAQPLTG FSPLISQDGQPLGLRARFALERLSALGKKGPLAMKDLQQMVMDDNVYLATQVLPDLLKFCAADLGADAAALKPVCVSLKGWDGRANLDSGIGLVHFQNIM QALQASPDVWRVPFDPKDPQHTPRGLAIEQPAVSKALREALLASAATAQKMGLKPETRWGDIQVVSSGARQTAIHGGPGTLGIYNAIQSVPREDGKLEVV SGTSYLQVVTFDDKGPHAQGLLAFSLSSDPESKYSRDQTEAFSKKQWSVLPFTEQQIAADPQYQLQTVREVAGKSAEVVAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site