Pseudomonas sp. HPB0071, HMPREF1487_08752

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47384	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00304	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47384	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR45436	SENSOR HISTIDINE KINASE YKOH	-	-	11	449	6.1E-51
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	433	446	2.9E-12
CDD	cd06225	HAMP	-	-	184	229	1.99652E-7
Gene3D	G3DSA:1.10.8.500	HAMP domain in histidine kinase	-	-	180	227	1.4E-7
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	235	294	1.2E-10
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	394	404	2.9E-12
Gene3D	G3DSA:3.30.450.170	-	IPR038428	Two-component histidine kinase, sensor domain superfamily	26	151	9.2E-41
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	376	390	2.9E-12
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	236	293	1.9E-9
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	410	428	2.9E-12
Pfam	PF00672	HAMP domain	IPR003660	HAMP domain	177	230	1.4E-9
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	283	447	4.98E-35
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	326	450	2.5E-31
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	342	447	1.2E-17
SUPERFAMILY	SSF158472	HAMP domain-like	-	-	180	233	1.57E-6
Gene3D	G3DSA:1.10.287.130	-	-	-	228	289	7.1E-12
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	233	289	1.25407E-7
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	218	293	3.73E-11
SMART	SM00304	HAMP_11	IPR003660	HAMP domain	179	234	1.1E-8
Pfam	PF16750	Sensor domain of 2-component histidine kinase	IPR031930	Two-component histidine kinase, sensor domain	39	150	1.1E-32
Coils	Coil	Coil	-	-	61	81	-
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	339	449	7.1E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.