Pseudomonas sp. HPB0071, HMPREF1487_08001
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009306 | protein secretion |
Inferred from Sequence Model
Term mapped from: InterPro:PF00263
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00263 | Bacterial type II and III secretion system protein | IPR004846 | Type II/III secretion system | 263 | 423 | 4.7E-44 |
| PRINTS | PR00811 | Bacterial general secretion pathway protein D signature | IPR001775 | GspD/PilQ family | 259 | 283 | 7.0E-13 |
| PRINTS | PR00811 | Bacterial general secretion pathway protein D signature | IPR001775 | GspD/PilQ family | 388 | 406 | 7.0E-13 |
| PANTHER | PTHR30332 | PROBABLE GENERAL SECRETION PATHWAY PROTEIN D | - | - | 151 | 435 | 2.8E-52 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 429 | 453 | - |
| PRINTS | PR00811 | Bacterial general secretion pathway protein D signature | IPR001775 | GspD/PilQ family | 411 | 425 | 7.0E-13 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 433 | 453 | - |
| Pfam | PF13629 | Pilus formation protein N terminal region | IPR032789 | Pilus formation protein, N-terminal | 55 | 123 | 4.3E-18 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.