Pseudomonas sp. HPB0071, HMPREF1487_07754

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003774 motor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009288 bacterial-type flagellum
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF003161
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 252 272 2.6E-63
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 199 224 2.6E-63
PANTHER PTHR30534 FLAGELLAR MOTOR SWITCH PROTEIN FLIG IPR000090 Flagellar motor switch protein FliG 3 336 1.5E-107
NCBIfam TIGR00207 JCVI: flagellar motor switch protein FliG IPR000090 Flagellar motor switch protein FliG 3 335 4.0E-100
Gene3D G3DSA:1.10.220.30 - - - 199 337 1.7E-43
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 9 25 2.6E-63
FunFam G3DSA:1.10.220.30:FF:000004 Flagellar motor switch protein FliG - - 93 195 8.0E-51
PIRSF PIRSF003161 FliG IPR000090 Flagellar motor switch protein FliG 3 337 5.1E-115
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 276 302 2.6E-63
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 118 141 2.6E-63
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 230 250 2.6E-63
Pfam PF01706 FliG C-terminal domain IPR023087 Flagellar motor switch protein FliG, C-terminal 222 328 4.1E-39
SUPERFAMILY SSF48029 FliG IPR011002 Flagellar motor switch protein FliG, alpha-helical 118 328 2.09E-65
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 38 64 2.6E-63
SUPERFAMILY SSF48029 FliG IPR011002 Flagellar motor switch protein FliG, alpha-helical 6 121 1.02E-22
Gene3D G3DSA:1.10.220.30 - - - 97 194 4.8E-24
Gene3D G3DSA:1.10.220.30 - - - 3 96 1.7E-21
FunFam G3DSA:1.10.220.30:FF:000001 Flagellar motor switch protein FliG - - 199 337 4.5E-56
Pfam PF14842 FliG N-terminal domain IPR028263 Flagellar motor switch protein FliG, N-terminal domain 9 108 1.5E-31
Pfam PF14841 FliG middle domain IPR032779 Flagellar motor switch protein FliG, middle domain 119 192 5.0E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.