Pseudomonas sp. HPB0071, HMPREF1487_07649
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. HPB0071 genomic scaffold aczIi-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTGGCACGTAACAAGCTGGACATCATTCTTCAGTATCTCAAAGCCGATCCCACTGTAAACCATGTAGTGATTTCTGGCTTTACCGATAATTCCGGTAAT CGACTCGATAACCGCCAGGAATCGCGGCTGCGTGCAATGGCTGTCATGCAGTATCTGAAAGCCAGCGGCGTTCCTGAGGAGCAAATGGAAATTCGCTTTT TTGGAGAGCAGTATCCTTTGGTCGCCAATAACAGCAAGGCAAATCGAGCCAAGAACAGAAGGGTGTCGATGGTGTTTACCCGTGAGCCTGTAGCCTCTGA CTCCAAGCCAGAGTCTTCTACGGCAGCGCCAGCCGACGCGCCGGCGGCCGTTCCAGCTACAGCTTCGCAAGGTGGTAAGCCAAGCAGTTAATAGCGTACC GGGTGTCGCCTAGGCAACTTCTTGTGTCGCGCCTCTATAAATAGCTCCGCTTGGCAAGTAGAATCATCTTCTTTCTAAGCAATGCGTGGGAGCGAGTGGC
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| DNA Sequence for Gene |
>HMPREF1487_07649
ATGACGGACGTCAAGAAGGTAGTCCTGGCGTATTCGGGCGGCCTGGATACTTCGGTGATCCTCAAGTGGCTGCAGGATACCTATAACTGTGAAGTCGTAA CATTTACAGCGGACCTTGGCCAAGGGGAAGAAGTGGAGCCCGCTCGCGCTAAAGCCAAGGCTTTAGGCGTCAAGGAAATCTTCATCGAAGACCTGCGTGA AGAATTCGTTCGTGATTTCGTTTATCCGATGTTCCGGGCGAATACGGTATACGAAGGCGAATACCTGCTAGGTACTTCCATTGCTCGTCCGCTTATCGCC AAGCGATTGATCGAAATTGCCAACGAAACGGGCGCTGATGCCATCTCCCACGGTGCAACCGGCAAGGGCAATGATCAGGTACGCTTCGAACTGGGAGCCT ATGCGCTCAAGCCTGGCGTAAAAGTTATTGCACCCTGGCGTGAGTGGGATTTGTTGTCCCGCGAAAAGCTCATGGATTATGCAGAAAAGCACAATATCCC GATCGAGCGTCACGGCAAGAAAAAATCGCCTTATTCCATGGATGCTAACCTCCTACACATCTCTTATGAAGGTGGTGTGCTGGAAGACACATGGACTGAG CATGAGGAGGACATGTGGCGCTGGACCAAGTCGCCAGAGGCTGCTCCGGATCAGCCGACGTATATCGAATTGACTTACCGTGCTGGTGATATCGTGGCTA TCGATGGCAAGGACATGACGCCTGCCCATGTGCTGGCTGAGCTCAATCGCATCGGTGGCGAAAACGGTATTGGCCGTCTGGATATCGTTGAGAACCGTTA CGTGGGAATGAAGTCGCGTGGCTGCTATGAAACGCCTGGCGGCACCATTATGCTCAAGGCCCACCGAGCTATCGAGTCCATTACCCTGGATCGTGAAGTC GCCCACCTCAAGGATGAGCTCATGCCTCGCTATGCGAGCCTGATCTATACCGGCTATTGGTGGAGTCCCGAACGCCTGATGCTCCAGCAGATGATCGATG CTTCCCAGTCCAACGTAAACGGGGTCGTACGTCTGAAGTTGTATAAAGGCAACGTAATTGTCGTTGGTCGTAAATCTGACGACTCCCTGTTTGATGCGAA TATCGCTACGTTTGAAGAAGACGGTGGTGCTTACGACCAGGCTGATGCAGCAGGTTTCATCAAGCTCAATGCATTGCGTATGCGTATCGCCGCTAATAGC GGACGCAAATTGTTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGATCTTGCCCCGGATCAATACCTGGGCAGCCCTTCCGTCTGGAGGGGCTCTCGCTCTTAAACGCTAATAAAAAAAGCCCAACCGGGCTTTTTTTATTT ACAGATCGAAATCGTATTCCGAGATCTGACGCTTCAAGCGACGCTCTTCAAGCATATTGTCTATCAAGCGGCGCTTGGTAAGGTTGGTTTTGCTGACAGG CACATCAGCAGCCTCAACGTCACCCTCGGTTTCTACGAAGTCATCATCAAGTTCGATATCACTTTTCTCGCTCGCCATGAGAAAACTCCTAGCATGAGGT GGTCAAGGAGCGGGTGCAGTTTGAGAGGACTACACAGCCCTTTTGGCGCACCTTATAGCGACAAAGTGATGAGTCGTAAAAAAGATTTTTTTAATCGATC AGCTTGAAAGTTACGGTACTTATCAATTATCCGATGTCTTGGCTTTGTATTCGCACAGGTCCTCAATGCGACAGCTCCCACAGCGGGGTTTTCGCGCCTG
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| Amino Acid Sequence |
>argininosuccinate synthase
MTDVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAKALGVKEIFIEDLREEFVRDFVYPMFRANTVYEGEYLLGTSIARPLIA KRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKKKSPYSMDANLLHISYEGGVLEDTWTE HEEDMWRWTKSPEAAPDQPTYIELTYRAGDIVAIDGKDMTPAHVLAELNRIGGENGIGRLDIVENRYVGMKSRGCYETPGGTIMLKAHRAIESITLDREV AHLKDELMPRYASLIYTGYWWSPERLMLQQMIDASQSNVNGVVRLKLYKGNVIVVGRKSDDSLFDANIATFEEDGGAYDQADAAGFIKLNALRMRIAANS GRKLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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