Pseudomonas sp. HPB0071, HMPREF1487_07641
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CAAAGGCCACCTT-N1-AAGGTGGCCTTTG | 3529335 | 3529361 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1185 | 3529335 | 3529361 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1186 | 3529339 | 3529357 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GTAATAAAAA-N17-TTTTTATTAC | 3530968 | 3531004 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AAAAAGCCCGC-N4-GCGGGCTTTTT | 3530974 | 3530999 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1187 | 3530979 | 3530994 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1188 | 3530979 | 3530994 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |