Pseudomonas sp. HPB0071, HMPREF1487_07291
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 14 | 124 | 2.9E-16 |
| SUPERFAMILY | SSF109604 | HD-domain/PDEase-like | - | - | 214 | 369 | 3.02E-11 |
| Pfam | PF13487 | HD domain | - | - | 259 | 319 | 6.8E-17 |
| Coils | Coil | Coil | - | - | 137 | 168 | - |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 12 | 124 | 1.2E-15 |
| CDD | cd00077 | HDc | IPR003607 | HD/PDEase domain | 212 | 322 | 7.90959E-6 |
| PANTHER | PTHR45228 | CYCLIC DI-GMP PHOSPHODIESTERASE TM_0186-RELATED | - | - | 10 | 367 | 1.3E-58 |
| Gene3D | G3DSA:1.10.3210.10 | Hypothetical protein af1432 | - | - | 180 | 370 | 2.4E-35 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 8 | 171 | 3.4E-27 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 10 | 176 | 5.83E-30 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.