Pseudomonas sp. HPB0071, HMPREF1487_06158

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. HPB0071
GCF_000478505.2|latest
Locus Tag
HMPREF1487_06158
NCBI Locus TagHMPREF1487_RS09175
Name
Replicon scaffold_1
Genomic location 1948453 - 1949340 (+ strand)

Cross-References

RefSeq WP_010796354.1
GI 498495623
INSDC ENA33390.1
NCBI Locus Tag HMPREF1487_RS09175
NCBI Old Locus Tag HMPREF1487_06158
UniParc UPI0002C98704
UniProtKB Acc N2J7S7
UniProtKB ID N2J7S7_9PSED
UniRef100 UniRef100_N2J7S7
UniRef50 UniRef50_C3KE43
UniRef90 UniRef90_N2J7S7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 11.05
Kyte-Doolittle Hydrophobicity Value -0.077
Molecular Weight (kDa) 32.8
Isoelectric Point (pI) 9.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000011 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: HMPREF1487_06158

Human Homologs

References

No references are associated with this feature.