Pseudomonas sp. HPB0071, HMPREF1487_06090

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:4.10.220.110	-	-	-	222	281	5.8E-90
Gene3D	G3DSA:3.55.50.10	-	-	-	95	189	5.8E-90
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	367	455	1.65E-33
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	445	626	1.1E-43
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	29	324	8.9E-81
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	358	459	5.3E-43
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	13	525	0.0
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	389	456	3.8E-14
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	11	185	8.5E-58
PANTHER	PTHR32305	-	-	-	29	628	4.5E-87
Gene3D	G3DSA:2.30.110.50	-	-	-	19	326	5.8E-90
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	193	367	7.48E-44
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	21	507	5.3E-126

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.