Pseudomonas sp. HPB0071, HMPREF1487_05370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HPB0071 genomic scaffold aczIi-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGCCGCCCAGGTGAAGCTGATGCTGGAAGACGGTTCCGAATACAAGCATCTGGGCAAGCTGCAGTTCTCTGAGGTGTCAGTGGATCAGGGAACCGGCT CGGTTACCATTCGTGCAGAGTTTCCCAACCCTGACCGTTTGTTGCTGCCAGGCATGTTCGTGCGTGCGCAACTGCAGGAAGGAGTCCGTCAGACGGCTAT CCTGGCGCCACAGCAGGGCATCTCGCGCGACCTGAGAGGTAACGCCGTAGCGATGGTTGTTACGCCGGACAACAAGGTCGAGCAGCGTACCGTGAAGACC GAGCGTACGATCGGCACCAACTGGCTGATCTCCGATGGCCTGAAGGCGGGCGACCAATTGATTACGGAAAACCTGCAGCGTATTCGCCCGGGTGCTTCGG TTACGACCAAGCCGGCCACCAATGTGGCTGGGCCTGGCGATTCGGCACAACCTGCTCAGCAGGGTAGTGCCGACAAGCAGCAATAAGGGAGCCGCTGTCG
DNA Sequence for Gene
>HMPREF1487_05370
ATGTCAAGATTCTTTATTGACCGCCCCATTTTCGCCTGGGTACTTGCCCTGGTGATCATGCTGGCGGGCGGTCTCGCCATTCTTAACCTACCGATCAACC AGTACCCAAACATCGCGGCACCGGCTGTTTCGATCCAGGTGAGCTATCCCGGCGCGTCGGCACAGACCGTTCAGGATACAGTCGTCCAGGTCATCGAGCA GCAGATGAACGGGATCGACAACCTGCGTTATCTCTCCTCGGAGTCCAACTCCGATGGCAGCATGACCATTATCGTGACCTTTAACCAAGGCACGGACCCG GACATTGCGCAGGTTCAGGTACAGAACAAGCTGCAGCTGGCGACACCGCTTCTGCCTCAGGAGGTGCAGCAGCAGGGCCTTCGGGTGGCCAAGTATCAGC GTAACTTCATGCTGGTGGTGGGTCTGGTGTCAAACAACGACTCCCTGACTCGTGAGGATCTGTCCAACTACATCGTATCCAACATGCGTGACCCCATCGC GCGGACCCCGGGTGTAGGTGATTTCCAGGTCTTCGGCTCGCAGTACGCCATGCGTATTTGGCTGGATCCGGCCAAACTGAATAAATATCAGTTAATTCCC GGAGATGTTTCCAATGCCATTCAGAGCCAGAACGTCCAGTTGGCTTCGGGCTCGCTGGGCGGTTTGCCTGCCGTTGAAAACCAGCAGCTCACCGCTACGA TCATTGGCCGTACCCGTCTGGAAACCCCAGAGCAGTTCGGTAACATTTTCCTGAAGGTCAATCCCGATGGTTCCCAGGTGCGGCTGCGTGACGTCGCACG TATCGAGCTGGGCGGTGAAAATTATTCGATCGACGCCCAGTTCAACGGCAAGCCTGCGTCGGGTATGGCGCTGCGTCTGGCAACTGGGGCTAACCTTTTG GATACGTCCAAGGCCGTTCGTGCGACCATTGAACGACTCAAGCCGTTCATGCCTGAAGGCATGGAAGTGGTGTACCCGTACGACACTACACCTGTAGTAA CTGCCTCCATTCATGAGGTGGTCAAGACACTGGGCGAGGCGATTCTGCTGGTATTCCTCGTGATGTATCTGTTCCTGCAGAACTTCCGAGCCACTTTGAT CCCGACTATTGCAGTTCCGGTCGTCTTACTGGGTACGTTCGGTATCCTGTTCGCGTCAGGCTTTACCATCAATATCCTGACCATGTTCGGGATGGTGCTG GCGATTGGTCTGCTCGTGGACGATGCCATCGTTGTGGTGGAAAACGTCGAACGGGTCATGGCGGAAGAGGGGCTAAGTCCCAAGGAAGCGACCCGCAAGT CCATGGACCAGATCCAGGGCGCGCTGGTGGGTATCGCTCTGGTGCTGTCAGCGGTATTCGTGCCGATGGCCTTCTTTGGCGGCTCGACCGGGGTGATCTA CCGGCAGTTCTCGATTACCATTGTTTCCGCTATGGCCCTATCGGTGCTGGTTGCTTTGATCCTGACGCCAGCGCTGTGTGCCACGATCCTCAAGCCGGTC GACAAGAACCATCACGAGAAGCGCGGCTTCTTTGGCTGGTTCAACCGCAAGTTCGACAGTGGCGTCAACCGTTATGAGCGCAGCGTCGCTACTGTTATCC GTCACAAGGTACCGTTCCTGCTGGTATATGTCGTCATTCTGGCTGGCATGGCGTTCATGTTTACCCGCATTGCATCATCCTTCCTGCCTGAGGAAGACCA GGGCGTAATTTTCGTGCAGGTAACCACACCAACCGGATCGTCTGCGGCACGTACCCAGGTTGCGCTGGATCAGATGCGCGAAATGATGATGAAGAACGAG CCGTCGGCAGTCAGCTCCATGTTTACGGTCAACGGCTTCAGCTTTGCCGGCCGTGGTCAGAGCTCCGGCCTTGCATTCGTTCAGCTCAAGCCTTGGGAAG ATCGTCCGGATGCCAAGGACCGCGCCAGTGCTGTAGCCGGACGCGCCATGGGTTATCTGTCGCAGATCAAGGATGCCATGATCTTTGCCATCGTTCCGCC AGCGGTACTTGAGCTGGGTAACGCTACCGGTTTCGACTTCTATCTTCAGGACAACTCCGGCCTTGGCCATGAGAAGTTGATGGAGGCGCGGAATCAATTG CTGGGCATGGCGGCACAGAATCCGAAGCTGACTCAGACTCGCCCCAATGGTTTGAATGACGAAGCGCAGTACAAGCTGATCATCGACGATGAAAAGGCCC GTGCGCTAGGTCTGTCCCAGACCGATATCAACCAGACCTTGTCAATTGCCTGGGCCTCCAGTTACGTCAATGACTTCATCGACAGAGGCCGCGTAAAGCG TGTGTATGTACAGGGCGAAGCCGATTCACGGATGAACCCGGAAGATCTGAGCAAGTGGTACGTACGTAACAGCAATGGCGAGATGGTGCCGGTATCGGCC TTTGCCCATGGCGAGTGGGTCTACGGTTCACCCAAGCTTGAGCGTTATAACGGTATCTCGTCTGTCGAGATCCAGGGCTCTCCTGCGCCTGGTTACAGTA CGGGCGATGCCATGACCGAAATCGAGAACATGGCCAAGGAGCTACCGCAGGGCGTTGGTATTGCCTGGACCGGCATGTCGTACGAAGAGCGACTTTCAGG TTCGCAGGCACCTGCCTTGTATGCCTTGTCCCTGGTAGTGGTCTTCCTCTGCCTGGCAGCACTATATGAGAGCTGGTCGATCCCGATTGCGGTCATTCTG GTAGTACCGCTGGGCGTGATCGGTGCGCTCCTGGCTACCTACTTCCGAGGTTTGGCAAACGACGTGTTCTTCCAGGTGGGCCTGCTAACCACCATTGGTT TGTCAGCCAAGAACGCGATTCTGATCGTGGAGTTTGCCAAGGAGTTGCACGAGGGCGGCAAGAACATCGTCGATGCCGCCGTAGAAGCCGCACGGATGCG TCTACGCCCGATTATCATGACGTCCATGGCCTTTATCTTGGGCGTGGTTCCGCTGGCCATCTCCAATGGTGCCAGCTCCGGTAGTCAGCATGCGGTTGGT ACGGGCGTGATTGGCGGGATGGTAACCGCAACCGTTTTGGCGATCTTCTGGATTCCCATGTTCTACGTCGTGGTCAGCAGTTTGTTCAAGGACAAGGCTT CACGTGATCAGGAATCAGGCGCCGAGGGAAGACATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTATGAAGAAGTCTCTTTTATCCATCGCAATAGGTGCAGTGCTGCTTTCGGGCTGCACCCTGATTCCCGACTACGAGCGGCCTGCATCGCCTGTGGAAAA CGCTTGGCCGCAAGGCGAGGCGTACAAAGGCAATCCAACCAGCAGTGGTTCGGAATACACGGCCGATATTGGCTGGCGTGAGTTCTATAGCGATCCGCAA TTGCAGCGTCTAATTCAAGTCGCTCTGGATAACAACCGTGATCTGCGGCAGGCGGCTCTGAATGTTCGCCTGTATCAGGCGCAGTATCGTATCCAGCGTG CAGAGCTGTTCCCGACCATTGGCGTCAATGCCAATGGTTCGCGGACGCGTACGCCGGCAGACATGAGCTCGGCAGCGGCGATCCAGGAGTTGCTGCAAAA CACTGGTCAGGCTGGCGCGGGAAGCTCTCGTAGCGGCTCGATCAACAGCCAATACACGGTAACGCTTGGCATGTCGGCCTATGAGCTGGATCTGTTCGGT
Amino Acid Sequence
>multidrug resistance protein MexB
MSRFFIDRPIFAWVLALVIMLAGGLAILNLPINQYPNIAAPAVSIQVSYPGASAQTVQDTVVQVIEQQMNGIDNLRYLSSESNSDGSMTIIVTFNQGTDP DIAQVQVQNKLQLATPLLPQEVQQQGLRVAKYQRNFMLVVGLVSNNDSLTREDLSNYIVSNMRDPIARTPGVGDFQVFGSQYAMRIWLDPAKLNKYQLIP GDVSNAIQSQNVQLASGSLGGLPAVENQQLTATIIGRTRLETPEQFGNIFLKVNPDGSQVRLRDVARIELGGENYSIDAQFNGKPASGMALRLATGANLL DTSKAVRATIERLKPFMPEGMEVVYPYDTTPVVTASIHEVVKTLGEAILLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFGILFASGFTINILTMFGMVL AIGLLVDDAIVVVENVERVMAEEGLSPKEATRKSMDQIQGALVGIALVLSAVFVPMAFFGGSTGVIYRQFSITIVSAMALSVLVALILTPALCATILKPV DKNHHEKRGFFGWFNRKFDSGVNRYERSVATVIRHKVPFLLVYVVILAGMAFMFTRIASSFLPEEDQGVIFVQVTTPTGSSAARTQVALDQMREMMMKNE PSAVSSMFTVNGFSFAGRGQSSGLAFVQLKPWEDRPDAKDRASAVAGRAMGYLSQIKDAMIFAIVPPAVLELGNATGFDFYLQDNSGLGHEKLMEARNQL LGMAAQNPKLTQTRPNGLNDEAQYKLIIDDEKARALGLSQTDINQTLSIAWASSYVNDFIDRGRVKRVYVQGEADSRMNPEDLSKWYVRNSNGEMVPVSA FAHGEWVYGSPKLERYNGISSVEIQGSPAPGYSTGDAMTEIENMAKELPQGVGIAWTGMSYEERLSGSQAPALYALSLVVVFLCLAALYESWSIPIAVIL VVPLGVIGALLATYFRGLANDVFFQVGLLTTIGLSAKNAILIVEFAKELHEGGKNIVDAAVEAARMRLRPIIMTSMAFILGVVPLAISNGASSGSQHAVG TGVIGGMVTATVLAIFWIPMFYVVVSSLFKDKASRDQESGAEGRH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site