Pseudomonas sp. P179, HMPREF1224_11070

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P179 genomic scaffold acBRO-supercont1.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTACGCCTATGGCGGCACCTACGTGTCGCTGAAGCTGAACGCCGACGGCAGCTACAAGGGCACCTCCGACCAGATCGGCGATGTCTACCTCGACACCTGG GAAGGCCAGACCCATCCGGGCGGCAGCAATACCGGCCACATCGACGTGGACAGCCAGGCCCAGGGCGCCAAGGACCTGAACCACGACGGCGGCGCGTTCG CCTTCAAGGAAAAGGGCGACGTCGACCTGAAAGGCACGGTGTCCGGCTTCATCCCGGCGATCGTCGGCTTCAAGACCCCGGTCACCAACAACGCCAGCCT GAGCAACTCGTTGCAGAACGTCTCGGGCAACGTCGGGGTGAACATCGCCGCCGGTGGCGGCAACCAGCAGAGCAACTCCCTGTCCATCGCCGCCGGTTGC AGCAGCTGCCCGGCCGGTGGCGAGAGCCTTGGCTTCTGATCCTGGCCCAGGGGTTCCGGCGCCAGCCGGAACCCTTTTCCATCCGACACAGGAACCGGCC
DNA Sequence for Gene
>HMPREF1224_11070
ATGCGCACGCTCATCCTTTCCCTGCTGCTGCTCGTCGACCTCACCGCCCAGGCGGCGACCCTCGGCTTTCCCGCCCTGCCCGGCGGCGGCCTGGTCTACA AGCAGGTGCAGAGCATCCGCGAGCGGCGCTTCGCCGACCTGGTCGAGCAGAAGACCGATTTCAGCTGCGGCGCCGCGGCCCTCGCGACCATCCTGGAGAA GGCCTACGGCGCCCCGCTCGACGAGCAGGCGGTGATCCAGGGCATGCTCGCCCACGCCGACCCGGAGATCGTCCGCACCCAGGGCTTCTCCATGCTCGAC ATGAAGCGCTACGTCGAATCCATGGGCATGCGCGCGCGCGGCTACCGCATCGAGGCGGCGCAACTGGAACAACTGAAGATACCCGCCATCGTGCTGATGG AAATCCGCGGCTACAAGCACTTCGTCGTCCTGCAACGCACCCAGGGCGAGTACGTGTACGTGGGTGACCCGGCGCTGGGGCACAAACGCTACGCGCTGAC AGAGTTCGCCAAGGGCTGGAACGGCATCGTCTTCGCCGTGATCGGCCAGGGATACGACCGCGGCAATCCGCTGCTGACGCCGCCCGAGCCGCTGACCGCG CGCAATCGCCTGGACCGCTTCAAACCGGTCAGGGACGCCGAACTGATGGAATTCGGCTTCATCCAGAGCGATTTCTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCAGGAGCCGGATGCTCCGGGAGCACGCCATGTACACGCACCACTGCTTCGTCCTCGCCTGCTGCCTGGGCGCTGCGCTGCCCGCCCCCGCCAGCGAC CTCTTCGCCCCCGCCGAACTGAGCGACCAGGAGCTTTCCCAGTTGCGCGGGCGCTACGTGCTGCCGGGGCGGATCGTCAGCTTCGGGGTGACCATGAGCA GCACCTGGCAGAACGCCAGCGGCCAGGTCCTCGGCGCACGCGTCGACCTGCAGGTGCGGCAGAACCTGGCGCGCCCGGTCCTCAACGTCACCCTGGTCGA TCGGCCAGGCGACGCCCCGCCACCCGTCGCCGGCAACGGCCAGGTCCTCGGCGGCGCCGGACTGGCGCAGACCCAGGGGGTCAGCCAGAGCATCCGCACC GCCGGCGACCACAACAGCGCCAGCAATGGCGTCAGCATCGAGGTCCGCCACGGCGAGGCGCCGCCGCCACTGCCGGGCGGCACGCCGCTGGAAGGTGCGC
Amino Acid Sequence
>peptidase C39
MRTLILSLLLLVDLTAQAATLGFPALPGGGLVYKQVQSIRERRFADLVEQKTDFSCGAAALATILEKAYGAPLDEQAVIQGMLAHADPEIVRTQGFSMLD MKRYVESMGMRARGYRIEAAQLEQLKIPAIVLMEIRGYKHFVVLQRTQGEYVYVGDPALGHKRYALTEFAKGWNGIVFAVIGQGYDRGNPLLTPPEPLTA RNRLDRFKPVRDAELMEFGFIQSDFF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site