Pseudomonas sp. P179, HMPREF1224_11048

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P179 genomic scaffold acBRO-supercont1.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCCTGGTCGCCGCCAGCATCACCTTCTTTATCCTCACCGTGCGTCGCCGCTGGCTGCTCCAGGAACTGCGCGCCGTCGAACGTGCGCGGGAGGCCGGC TGATGCGCTTCCTCGAACACGACGAGGCGGACGACCCGATCCTCTCGATGGTCAACCTGATCGACCTGTTCCTGGTGGTGATCGGCATCCTCCTGATCGT CATCGTGCAGAACCCGCTCAACCCGTTCAGCCAGGACAAGGTGGTGGTGGTCGAGAATCCCGGCGAGGCGGACATGCGCATGCTGGTCAAGGACGGCAAG GAGCTGAAGCGCTACCAGGCCAGCGGCGAGATCGGCGAAGGGCAGGGCAGCCGCGCCGGGGTGACCTACCGCTTGGCCGACGGACGGATGATCTACGTGC CGGAGAGCGGAGGGGAGGCCGGCAAGTAGCGACGCGTACGGCGGAGAGCTGGGACTTTTGCCCGGAGTTCCCGGATAATGGCCGGTTTCCGTTTCTCTTG
DNA Sequence for Gene
>HMPREF1224_11048
GTGCTCGCCGTGGAAGTAAAGGTCAATTTTCTCGATAACCTTCGACTGGAAGCCAGGTTCGATGATTTCACGGTGATCGCCGACCAGCCGATTCGCTACA AGGGCGACGGCTCCGCGCCGGGGCCGTTCGACTACTTCCTGGCGTCGTCGGCGCTGTGTGCCGCCTACTTCGTCAAGCTGTACTGCCAGACGCGCAACAT CCCCACCGACAACATACGCCTGTCGCAGAACAACATCGTCGACCCGGAGAACCGCTACCGGCAGATCTTCAAGATCCAGGTGGAACTGCCGGCCGACATC TCGGAGAAGGACCGCCAGGGCATCCTCCGCTCCATCGACCGCTGCACGGTGAAGAAGGTGGTGCAGACCGGGCCCGAGTTCGTCATCGAGGAGGTCGACA ACCTCGATGCCGACGCCCAGGCGCTGCTGATGCCCGGCACCGATGCCGCCGGCTGCACGCGCATCCCGGGCAAGGACCTGCCGCTGGAGCAGACCATCGC CAACCTGTCGGCCATCCTCGCCGGCCTCGGCATGAAGATCGAGATCGCCTCCTGGCGCAACATCGTGCCCAACGTCTGGTCGCTGCACATCCGCGATGCG CAGTCGCCGATGTGCTTCACCAACGGCAAGGGCGCGAGCAAGGAAAGCGCGCTGGCCTCGGCGCTGGGCGAATTCATCGAGCGGCTGAACTGCAACTTCT TCTACAACGACCAGTACTGGGGAGAAGAGATCGCCAATGCGGCGTTCGTCCATTACCCGGACGAACGCTGGTTCAAGCCCGGCCGCGACGATGCGCTGCC GCTGGGACTGCTCGACGGCCATTGCCTGGCGATCTACGACCCCGACGGCGAGCTGCGCGGCTCGCACCTGTACGACACCAACTCGGGCAACGTGCAGCGC GGTATCTGCGCCTTGCCCTTCGTGCGCCAGTCCGACGGCCAGGTGGTGTATTTCCCCTCCAACCTGATCGAGAACCTCTACCTCAGCAACGGCATGAGCG CCGGCAATACCCTGGCCGAAGCGCAGGTGCAGTGCCTGTCGGAGATCTTCGAGCGTGCGGTCAAGCGGCAAATCCTCGAAGGCGAGCTGGCGCTGCCGGA CGTGCCGCCGGAGGTGCTGGCCAAGTACCCGGGCATCCTCGCCGGGATCCGCGGCCTGGAAGAGCAGGGCTTCCCGGTACTGGTCAAGGACGCCTCGCTG GGCGGCGAATTCCCGGTGATGTGCGTGACCCTGATGAATCCGCGCACCGGCGGCGTGTTCGCTTCCTTCGGCGCCCACCCGAGCTTCGAGGTGGCCCTGG AGCGCAGCCTGACCGAACTGCTCCAGGGGCGCAGCTTCGAAGGCCTGAACGACCTGCCCCAGCCGACCTTCGAAAGCCATGCGCTGACCGAGCCGAACAA CTTCGTCGAGCATTTCATCGATTCCAGCGGCGTGGTGTCCTGGCGCTTCTTCAGCGCCAAGGCCGATTTCCCGTTCGTCGAGTGGGACTTCACCCGGCAG GGCGAGGCTGCCAACGCCGAGGAAGCCGCGACCCTGTTCGGCATCCTCGAAGCCATGGGCAAGCAGGTCTACATGGCGGTGTACGAGCACCTCGGCGCTA CGGCCTGCCGGATCCTGGTGCCGGGCTACTCGGAAATCTATCCGGTGGAAGACCTGATCTGGGACAACACCAACAAGGCCCTGGCGTTCCGCGAGGACAT CCTCAACCTGCACCGCCTCGACGATGCTGCGCTCGGGGCGTTGCTGGAGCGCCTGGAAGACTGCGAGGTGGACGATTACACCGACATCACCACGCTGATC GGCGTCGAGTTCGACGACAACACGGTCTGGGGCCAACTGACCATCCTCGAGCTGAAAGTGCTCATCGGCCTCGCCCTGAAGCGCTTCGAAGACGCCAAGG AAGGCGTGGAGGCGTTCCTCCAGTACAACGACAACAGCGTCGAGCGCGGCCTGTTCTACCAGGCGCTGAACGTGGTGCTGGAGGTCGTCCTCGACGACGA GCTGGAGATCGCCGACTACGAGGCCAATTTCCGCCGCATGTTCGGCGACGCGCGGATGGACGCCGCGCTGGGCTCGGTGGACGGCAGCGTGCGCTTCTTC GGCCTGACGCCGACCAGCATGAAGCTGGAAGGGCTCGACCGGCACCTGCGGCTGATCGACAGCTACAAGAAGCTGCACGCGGCGCGAGCCAGGATGCAGC CCGTGGTCGACGGCGAGGCCGGCGCTGCCGCGGCTGGCGGTCTCAAGCCTCGGCGCATGGCGATCCGCAAGCGCAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGGGCGCCGAGGTCAGGGCGCGAGGATGATCATGAGGGAAACTTGATTTCATCACGAAGAAATTGAGTTTGTCTCATGGCATGAGCCTCACGAGAATT CCTCCATCGACCTTTCGACTGGAGGAACACCCATGGCCCTGGCCCACACTCTCGGCTTCCCACGCATCGGACGCGATCGCGAACTGAAAAAAGCCCAGGA AGCGTTCTGGAAGGGCGAGCTGGACGAGGCCGGCCTGCGGGCCGTCGGTCGGCAGCTGCGCGCTGCCCACTGGCAGGTACAGAAGGATGCCGGCATCCAG TTGCTGCCGGTCGGCGATTTCGCCTGGTATGACCAGGTGCTGACCCATTCGCTGACCTTCGGCGTGATCCCCGAGCGCTTCCGGGCGCACGGCGAGGCCG GGCCGACCCTGCATACCCTGTTCGGCATGGCCCGTGGCGTCAGCGACGACAGTTGTTGCGGCGGTGCCCATGCCCAGGAAATGACCAAGTGGTTCGACAC
Amino Acid Sequence
>TIGR03549 family protein
MLAVEVKVNFLDNLRLEARFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQTRNIPTDNIRLSQNNIVDPENRYRQIFKIQVELPADI SEKDRQGILRSIDRCTVKKVVQTGPEFVIEEVDNLDADAQALLMPGTDAAGCTRIPGKDLPLEQTIANLSAILAGLGMKIEIASWRNIVPNVWSLHIRDA QSPMCFTNGKGASKESALASALGEFIERLNCNFFYNDQYWGEEIANAAFVHYPDERWFKPGRDDALPLGLLDGHCLAIYDPDGELRGSHLYDTNSGNVQR GICALPFVRQSDGQVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKRQILEGELALPDVPPEVLAKYPGILAGIRGLEEQGFPVLVKDASL GGEFPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFSAKADFPFVEWDFTRQ GEAANAEEAATLFGILEAMGKQVYMAVYEHLGATACRILVPGYSEIYPVEDLIWDNTNKALAFREDILNLHRLDDAALGALLERLEDCEVDDYTDITTLI GVEFDDNTVWGQLTILELKVLIGLALKRFEDAKEGVEAFLQYNDNSVERGLFYQALNVVLEVVLDDELEIADYEANFRRMFGDARMDAALGSVDGSVRFF GLTPTSMKLEGLDRHLRLIDSYKKLHAARARMQPVVDGEAGAAAAGGLKPRRMAIRKRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site