Pseudomonas sp. P179, HMPREF1224_10647

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P179 genomic scaffold acBRO-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCCAGCTCCAACAAACCATCCGCCATGGCCGCCAGGGCCAGATGCCGGCCCAGGAGCCCTACCTGGGCAAGGAAAAGGTGCACATCCTGGCCGCCTAC ATCTACAACCTGTCGCACAACCAGGGCAGCAACTGACCCCTCCCCCCACCCGCGCCCTCCCGGGCGCGGGTCCTTCCCCCGGTCTCAGACCTTAGTCCCA GGCGGCGCGACGAAGTGTCGCACCAGCGGACGCCTTTCCTACCCTTCCTTTTCAATCGCGTCTAAGCTGCTCTGCATTCGTCCCTCTCCGGCAGAGCGAC GGGACACCTAACTTCACCGGCCGAACCCACTCGCCCGGATAGCGCCAGAAAGCCATACGGCCGCCTTGGAAAGCGCTCTGAAGCAGGCATCAAACTGGCG TCGCCCCTGGCCTGGCGCGTTGCAATGCCCACCCGCTTTCTCCATACTTGCCGCCGATTTTTTGTCCCTAAAAAAGTCCATTAACCGTGGAACCCCTAGC
DNA Sequence for Gene
>HMPREF1224_10647
ATGAGCACAGCAATCAGTCAGACTGCTTATAACTATAAGGTGGTCCGCCAGTTCGCCGTTATGACGGTGGTCTGGGGGGTCATTGGAATGGGTCTCGGTG TCCTGATCGCCGCCCAACTGGTATGGCCCGAATTGAACTTCGACCTGCCGTGGACGAGCTTCGGCCGCCTTCGCCCCCTGCACACCAACGCGGTGATCTT CGCCTTCGGTGGGTGCGCCCTCTTCGCCACCTCGTACTACGTGGTGCAACGTACCTCGCAAGCCCGACTGATTTCAGACACGCTGGCGGCCTTCACCTTC TGGGGTTGGCAGGCCGTGATCGTGGGCGCCGTGCTGACCCTGCCGCAGGGTTTCACCACCTCCAAGGAATACGCCGAACTGGAATGGCCGCTGGCCATCC TCCTGGCGATCGTCTGGATCACCTACGCGATCGTGTTCTTCGGCACCATCGTCAAGCGCAAGGTCAAGCACATCTATGTGGGCAACTGGTTCTACGGTGC CTTCATCCTGGTGACGGCGATGCTGCACATCGTCAACCACATGTCGCTGCCGGTGAGCTGGTTCAAGTCCTACTCCGCCTACTCCGGCGCCACCGATGCG ATGGTCCAGTGGTGGTACGGGCACAACGCCGTGGGCTTCTTCCTGACCACCGGCTTCCTCGGCATGATGTACTACTTCGTGCCCAAGCAGGCCGAGCGTC CGGTCTATTCCTATCGCCTGTCCATCGTCCACTTCTGGGCGCTGATCTCCCTGTACATCTGGGCCGGCCCGCACCACCTGCACTACACCGCGCTGCCGGA CTGGGCGCAGTCGCTGGGCATGGTGATGTCGCTGATCCTCCTGGCACCGAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCCGGCGCCTGGCAT AAGCTGCGCACCGACCCGATCCTGCGCTTCCTGGTGGTGTCCCTGGCGTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCGATCAAGACCGTCA ACGCCCTCTCCCACTACACCGACTGGACCATCGGCCACGTGCACGCCGGCGCCCTCGGCTGGGTGGCGATGATCTCCATCGGCTCGCTCTACCACCTGAT CCCGAAAGTCTTCGGTCGCCCGCAGATGCACAGCATCGGCCTGATCAACGCGCACTTCTGGCTGGCCACCATCGGCACCGTGCTGTACATCGCCTCGATG TGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGCGCGGTCAACGAGGACGGCACCCTGACCTACTCCTTCGTTGAAGCACTGGTCGCAAGCCACCCGG GCTTCATCGTGCGCATGATCGGCGGTGGTTTCTTCCTCACCGGCATGCTGCTGATGGCCTACAACACCTGGCGCACCGTGCGTGCTGCCAAGCCGGCCGA ATACGAAGCCGCCGCGCAGATCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGCCCGACGTAAATGAAGAACCACGAAATACTCGAGAAGAACGTCGGCCTGCTGGCCATCTTCATGGTGATCGCCGTCAGCATCGGCGGCCTGACCCA GATCGTTCCGCTGTTCTTCCAGGACGTGACCAATACCCCGGTCGAAGGCATGAAGCCGCGTACCGCCCTGGAACTGGAAGGTCGCGACATCTACATCCGC GAAGGCTGCGTCGGCTGCCACTCGCAGATGGTCCGTCCGTTCCGTGCCGAGACCGAACGCTACGGCCATTACTCGGTCGCCGGTGAAAGCGTCTGGGACC ACCCGTTCCTGTGGGGTTCCAAGCGTACCGGCCCGGACCTGGCCCGCGTCGGCGGCCGTTACTCCGACGACTGGCACCGCGCGCACCTGTACAACCCGCG CAACGTGGTGCCCGAGTCGAAGATGCCCGCCTACCCGTGGCTGGTAGAGAACAAGCTTGATGGCAAGGACACCGCCACCAAGATGGAAGTCCTGCGCAAG
Amino Acid Sequence
>cytochrome oxidase subunit I
MSTAISQTAYNYKVVRQFAVMTVVWGVIGMGLGVLIAAQLVWPELNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYVVQRTSQARLISDTLAAFTF WGWQAVIVGAVLTLPQGFTTSKEYAELEWPLAILLAIVWITYAIVFFGTIVKRKVKHIYVGNWFYGAFILVTAMLHIVNHMSLPVSWFKSYSAYSGATDA MVQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPVYSYRLSIVHFWALISLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWH KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGSLYHLIPKVFGRPQMHSIGLINAHFWLATIGTVLYIASM WVNGITQGLMWRAVNEDGTLTYSFVEALVASHPGFIVRMIGGGFFLTGMLLMAYNTWRTVRAAKPAEYEAAAQIA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site