Pseudomonas sp. P179, HMPREF1224_10535

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P179 genomic scaffold acBRO-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGGCAGGCGGTGCTGGAGATGAACTTCGAGTACGTCAACTCGGAGGTCAACCCGGCCATGGCCAACATCGTCAGTCCCAGCGAGGTGGTGGTGGTCTC CACCTTCCACATCGAACTGGACGGCGGTGGCGGCGACCTGCACATCACCATGCCCTATTCGATGATCGAGCCGATCCGCGAGATGCTCGACGCCGGTTTC CAGTCCGACCACGACGACCAGGACGAGCGCTGGATCAAGGCCCTGCGCGAGGACGTGCTGGACGTCCAGGTACCGCTCGGCGCCACCGTGGTCCGCCGCC AGCTCAAGCTGCGCGACATCCTGCACATGCAGCCGGGCGACGTGATCCCGGTGGAGATGCCGGAACACATGGTGATGCGCGCCAACGGCGTGCCCGCCTT CAAGGTCAAGCTGGGCGCCCACAAGGGCAACCTGGCGCTACAGATTCTCGAAGCGGTCGAGCGCTCGCGCTGACCGCTTCCCCCGGAGGAAAGACGAACC
DNA Sequence for Gene
>HMPREF1224_10535
ATGGCAGACGAAGAAAAAGTGACCACCGAGGAACAGGCACTGGCCGACGAATGGGCGGCGGCGCTGGCCGAGGCGGGCGACGCCAGCCAGGACGACATCG ATGCGCTGATGGCCCAGGGCGGCGCGACTCCCGTGGCGGAGTCGAGTACCCCGCGGGCGCCGATGGAAGAGTTCGGCGCTTCGCCGAAGGCACCGACCAT TTCCGGCCTGGAGGGGCCCAACCTGGATGTGATCCTGGACATCCCGGTGACCATTTCCATGGAGGTCGGGCATACCGACATCAGCATCCGCAACCTGCTG CAGCTCAACCAGGGGTCGGTGATCGAACTCGATCGCCTGGCCGGCGAGCCGCTGGACGTACTGGTCAACGGCACCCTGATCGCCCACGGCGAGGTGGTGG TAGTGAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGTCCCAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CATGCGTCGCTACCTGTTCGCCGGCTTCCTGCCGGCACTCGCCTCGCTGAGCGCGCCGCTGTGCGCCGCCGAGGGGACGACGGGTGCCGCCGCGCCGACG GTGGGCGCCGCTTCCGGCGCCGCCGCGCAACTGGCCCAACTGGTGCTCGGCCTGGGCCTGGTGATCGGCCTGATCTTCCTGCTCGCCTGGCTGGTGCGCC GGGTGCAACAGGCCGGTCCGCGCGGCAACCGCTTGATCCGCACCCTTGCCAGCCAGCCGCTGGGTCCGCGCGACCGGCTGGTGCTGGTGCAGGTCGGTGA GGAGCAGATCCTGCTCGGCCTGACGCCCGGCCGGATCACGCCGTTGCACGTGCTCAAGGAGCCGGTACACCTGCCGGACGGCGAGCCGGCCACGCCGGAA TTCGCCCAGCGCCTGCTGGAGCTGCTGAACAAGGACCCCAAGGGCAAGCCATGACTCCGCGCATCTCCCTGGCCGGCGCGCTCGCCGCGCTCTGCCTTCT
Amino Acid Sequence
>flagellar motor switch protein FliN
MADEEKVTTEEQALADEWAAALAEAGDASQDDIDALMAQGGATPVAESSTPRAPMEEFGASPKAPTISGLEGPNLDVILDIPVTISMEVGHTDISIRNLL QLNQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site