Pseudomonas sp. P179, HMPREF1224_10353

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P179 genomic scaffold acBRO-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCGCCGGAGCGCCGCGACGGTGTCCTCGGCGCGAGCAACGCGGTGATCATCCGCCCCGGCAAGATCGACCGCTCACCCTGCGGCACCGGCTGCTCGGC GCGGATGGCGGTGCTCCAGGCGAAAGGCCAGCTGCGGGTCGGCGAACGCTTCGTCGGGCGCTCCATCATCGGTTCGGAATTCCACTGCCACATCGAGTCG CTGACCGAACTCGGCGGCCGTCCGGCGATCCTCCCGTGCCTGTCCGGGCGGGCCTGGATCACCGGCATCCACCAGTACCTGCTCGACCCGGACGATCCCT GGCCGCAAGGCTATCGGCTGTCCGACACCTGGCCCGGCGGCCACTGCTGACCACCCCGCCCGACCGCAGGCAGCGGCCGGGCGGAAACCGATCCGGCGCG TACCGGATCGCCCACGACGGCGAACGCTGCCGTCGCCCTGTGACTCGGACCGCAGCGGTCCGACTGAATTCGTATACGAAATACGAAGAAAGGAGAAACC
DNA Sequence for Gene
>HMPREF1224_10353
ATGAGCAAGCACGTCAACTGGAGCGGCGTATTCCCCGCAGTCACCACCCAATTCAACGCCGATTTCTCGGTGAACCTGGAGGAAACCCACACGGTCATTT CCAACCTGGTGCGCGACGGCGTGTCCGGGCTGGTGGTATGCGGCAGCGTCGGCGAGAACACCTCGCTGACCATCGAGGAGAAGATGGCCGTCACCGAGGT CGCCAAGGATGCCTCCGGCGGCCGCGTGCCGGTGATCTGCGGGATCGCCGAGTTCACCAGCGCCGGCGCGGCGAAGGTGGCCAAGGCGGTGGAGCGGGTC GGCGTCGACGGCATCATGGTGATGCCGGCGCTGGTCTATTCCTCCAAGCCGCACGAGACCGCCGAGCATTTCCGCAGCGTGGCCAGCGGCACCGACCTGC CGGTGATGGTCTACAACAACCCGCCGATCTACCGGAACGACGTCACCCCGGACATCCTGGTTTCCCTGGCCGACTGCGAGAACATCGTCTGCTTCAAGGA CAGCTCCGGCGACACCCGCCGCTTCATCGACGTACGCAACCAGGTGGGCGAGCGCTTCATCCTCTTCGCCGGCCTCGACGACGTGGTCCTGGAAAGCGTG GCGGTGGGTGCCCAGGGCTGGATCTCGGGAATGTCCAACGTGTTCCCGAAGGAAGGCGAGACCATCTTCCGCCTGGCCAGGGCCGGGCGCTTCGCCGAGG CGATGCCGATCTACGAGTGGCTGATGCCGATCCTCCATCTCGACGCCCGTCCCGACCTGGTGCAGTGCATCAAGCTCTGCGAGGAACTCGCCGGTCGCGG CAGCGCCCTCACCCGTCCACCGCGCCTGGCCCTGCGCGGCGCCGATCGCGAGCACGTCGAGCGGATCATGGCCAAGGCCCTGGCCAGCCGGCCGGCGCTG CCGGACGTCGGCTTGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGGCGCCGCGCCCTCGCCGCCTCGCTCCCCAGGGAGCGGCCGGCGAGAGCCAGCGGCAGAGCATTCCGTCCACCGTCCCCAGGGAGGCCCCATGCCCAG TATCCTCGGTCACAACTACGTCGGCGGCGCTCGCAGCGCCGCCGGCAACCTCATCCTGCGCAGCCTCGACGCCGACAGCGGCGAAGCGCTGCCCTACGCC TTCGTCCAGGCCACCGAGGCGGAGGTCGACGCCGCCGCCCGCGCCGCCGAACGCGCCTATCCACACTACCGGCAACTGTCCGCCGCGCGCCGCGCCGGAT TCCTCGAGGCGATCGCCTCGCGCCTCGACGCCCTGGGCGACGACTTCGTCGCCCTGGTCCGTCGCGAGACCGCGCTGCCCGCCGTACGCATCCAGGGCGA ACGGACACGTACCGCCAACCAGTTGCGGCTGTTCGCCGAAGTCCTGCGGCGTGGCGACTTCCACGGCGCGCGCATCGATCGCGGACAACCCGGGCGTACC
Amino Acid Sequence
>dihydrodipicolinate synthase
MSKHVNWSGVFPAVTTQFNADFSVNLEETHTVISNLVRDGVSGLVVCGSVGENTSLTIEEKMAVTEVAKDASGGRVPVICGIAEFTSAGAAKVAKAVERV GVDGIMVMPALVYSSKPHETAEHFRSVASGTDLPVMVYNNPPIYRNDVTPDILVSLADCENIVCFKDSSGDTRRFIDVRNQVGERFILFAGLDDVVLESV AVGAQGWISGMSNVFPKEGETIFRLARAGRFAEAMPIYEWLMPILHLDARPDLVQCIKLCEELAGRGSALTRPPRLALRGADREHVERIMAKALASRPAL PDVGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site