Pseudomonas sp. P179, HMPREF1224_08210

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P179 genomic scaffold acBRO-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTCCTCCCACTGGTCGTGGGCGCGTACCCGGCGTACCTGTTCGGGCGTGCGCAGGCGTTGCGCCTCCAGCACCGCGCCGAGATCGGCGACGGCCGCAGC CGAGTCCGCCGCCGGCGGCGGCGGGAGGTAGTCGGCCAGGCGCGGTGGGTGGGCCAGCGGATAGGGCGCGGCGGCGGTCTCCCCGAGACAAGACAGCGGT GCAAGCAGCGAAAGGCAGAGCAAGAGCGAAGGGCATAGGGTCTTGTTGTTCATGAAGCGTATTCCCTGAGGCGAGGTTGCATCGGGAGCCTAGGCTCCCA CCCACGGCCGTTGCGGATGACGGCCGACGCCACACTCTCCGTCGGTGACTTCCGAAATGCTTGACCCGGCCTGCCGTTGCACATGCCAGCCCCTGCCAAT GGCAGGCCCCGGCAAAAGCCGAGGCAGGGAAACACAAGCGGCCTGCGGAGCGACTTCCGAGACTGCGCCCACCTGGCACTCAGGTGGGAGAAAACAATAA
DNA Sequence for Gene
>HMPREF1224_08210
ATGCAAAATCTCAGACGCGCTGTATTCGCCGGCCTGGTCGCCGGCACGCTTTCCGAAGGGGCGGCCGCGACGGCCGGGGATGGGGGCTTCGTCGAGGACA GCGAACTGCAGTTCCTCGCTCGCACCTACTACTTCAACCGCGACTACCGCGACAGCCCGAACAACGCCGGGCGCAACCGCTTCAAGCCCAGGAGCGAGCG CAACGGCTACCGCGAGGAAGCCACCCAGGGCCTGCGCCTCCAGTTCGCCTCCGGCTACACGCCGGGCAGCCTCGGCTTCGGCCTCGACGCCCATGCCATG CTCGGCCTGCAACTGGACAGCGGCGGCGGCCGCACCGGCACCGGCAACCTGCCGGTCGGCGCCGACGGCCATCCCGACCATCGCTACGGCAAGGTCGGTG GCGCCCTCAGGCTACGCCACGGCGAAACCCGCCTGAAGTACGGCCAGACCACCACCAGCGCGCCGGTGTTCGCCGCCAGCAGCAACCGCACGCTGGCCGG CATGGCCTACGGCCTGCTGCTGGAGGACCGCTCGTTCGACGGGCTGCTGCTCGAGGGCGGGCGCTTCACCGCCGCCTCCGGCCCCGGCGAATCCAAGGTC CGCGGCGACATCAGCACCGTCTACGGACGCCTCGGCGCCTATCCGGTGCGCCTCGACGCGGTCGGCTTCCTCGGCGGTCAATGGCAGGCCACGGAGCGGC TGCAACTGTCGCTCTACGCCTCGCGCTTCGACGACATCTGGCAGCAGGCCTATTTCGGCGCCAGCCATCGCCAGCCGCTGGGCGGGGAGCACGCGCTGCG GGTCGACCTCGACGCCTACCGCACCCGCGACAGCGGCCAGAGCCGCTTCGGCCGCATCGACACCCTGGCCAGCTCCCTGGCCCTGGGCTACGAACAGGGA CCGCAGCGCATCACCCTGGCCTACCAGCGTGTCCATGGCGAGCAGCCGTTCGACTACATGGCCTTCGGCGACGGGCGCTCCAGCGCGTCCATGGTACTGG CCAACTCGGTGGGCTACTCCGACTTCAACGGACCGGGCGAGCGTTCCTGGCAATTACGCTATGACCTGGACCTCGGCGCGCTTGGCCTGCCTGGGCTCAG CCTGCATGCGCTGCATGCCCGCGGCCGTGCCGGGGCCAGCGCCAGCAGTGCCGCCGAGAGCATCTACGCCGGACTCTACGGGCGTGACGGGCGGCACCGG GAAAGCGACCTCGGCTTCGCCTATCGGGTCAAGGCAGGCCCCCTCGCCGGCCTGGCGCTGCGCGCCTCGCAGGCCTGGCACCGGGGCAACGCGAGCTATC TCGACGGCGACATCGACGAAACCCGGCTGGTCGTCGATTACTCCCGCTCGATCTGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCCCGGGCCGCCCCGCGAGGCGGCCCGGATCGTCCTCACGCGCGCGGCAGCAACTGGATGAACAAAGGCGTGGAGAGCAGCACCAGCAGCGTGGTGAT CAGCACCATGCCTGCCACTTCGTTCACCGGGCCGTCGTAACGCTTGGCCAACAGGTAGGTGAGCACCGCGGTCGGCATCCCGCACTGGATGGCGAAGGTG CCCGCCGCCACCGCCTCCATGCCCAGGCCGGCAGCGATCCCATAGCCGACCGCGAAACCGCCCCAGACCCGCACCAGAGACAGCAGCAACGGCCGCCAGG TCTCGTGCAGGCGCAGACCGGCCAGCGACAGGCCGAGCATCACCAGCATCAGCGGCACGGTAATCCCGCCCAGCAGGCGGGTCACATCGCGCAACGGCGG CGGCAGGCTCCAGCCCAGGGCGATCAGGCCCAGCGCCACGGCCAGGGCATAGATCATCGGGTTGCGCAGGATGCTCGCCGGGGTGATATCGCCCGAAGCG
Amino Acid Sequence
>hypothetical protein
MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYYFNRDYRDSPNNAGRNRFKPRSERNGYREEATQGLRLQFASGYTPGSLGFGLDAHAM LGLQLDSGGGRTGTGNLPVGADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAASSNRTLAGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKV RGDISTVYGRLGAYPVRLDAVGFLGGQWQATERLQLSLYASRFDDIWQQAYFGASHRQPLGGEHALRVDLDAYRTRDSGQSRFGRIDTLASSLALGYEQG PQRITLAYQRVHGEQPFDYMAFGDGRSSASMVLANSVGYSDFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGASASSAAESIYAGLYGRDGRHR ESDLGFAYRVKAGPLAGLALRASQAWHRGNASYLDGDIDETRLVVDYSRSIW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site