Pseudomonas sp. P179, HMPREF1224_06643

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P179 genomic scaffold acBRO-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCAGTGTTGCTCCTGAATTTCCGAAGGAAAGGCTTCTTCCGCTTGAGCCAAGTGTTCTCTCTAAGAATATAAGTCGGCAGGTAAAAGAAGAGCGGAAGTA TAATGAGGAAAAAATCAAGCGGGATAGGGAGGGTGGCGGAGAAAGCAGTGGAATACCTTGTTGTAAAACTCTGCATGTGAGCATAGGCTATGATGGCACT AATAATAATGATCGGGCTGATGGTGCATCATTGTCGCCTTCTAGAAGTAATGTGGCAAAGCTATTTCATGCTTCTGTCGGAGAAGGCTCCGTGCAGGAAG GGTTGGGTTTCTTTCGATATTACTGCCCTGGGGTTGGTACGGTATTTCCAGATATTCGGGAATATACTCCGTCGAGTCTCGGTTTGATTGCGGCGGCAGG TGGGGAGAACAGAGTAAACTGGGGAATAACCCGCTTGGTTGATGTTTTGCAAGGAACGCTTACCCCAGAAAGTCCTCTTCTGCTAGATGAGTCTCAAACA
DNA Sequence for Gene
>HMPREF1224_06643
ATGATTAAGAACATGGCAACCAATGGAATTGCCAAGGTTCTAACCGGTGGGTTGTTGGAGAACGGCGAGAAAAAACGCCGAGCTGCCTTGGAGCCAAAAC TCAAGGAACTGGAGGAAAAGCTTCGCCAGCGTCAGGACTCAGGGCAGAAACCGCATATCCTGGCCATGCGTTTGTATATCTATGGATTCTCCCGTGGGGC GGCGGAGGCACGAGCCTTCGCCAACTGGCTGCAGGAGCTGACTCGGGCCAGCGGTGCCGATGGCCGGGTGGAATATCGCTTCGCCGGCCTGCCGATCTCC ATCGAGTTCCTCGGCCTTTTCGATACCGTGGCGGCAGTTGGACTGGCGGATAGCGCGCCGTTCGCCGCCGGACATATGGATTGGGCCGACGGCACCATGC GGCTGCCCGACGAAGCCCAGGTTCAGTGCCTACCGACCACATTGCCGGAAGACTGCGCTTTTCTGAAACGTTGCGTGCATTTGATCTCATGCCATGAGCA GCGTGCCAGTTTTCCGCTGGATTCGATCCGCCGTCGCGACCTGGATGCCAACGGACGTCGTACGGGGCCTTCCTGCTATCGGCAGGGTACGGTGGAATAT GCATACCCTGGTGTTCACTCGGATGTTGGAGGGGGTTATGGCGTTGGCAACCAGGGTAAGGCGGTGGGAGGTTCGGAATTCCTGCTATCCCAGATAGCGC TGCAGCATATGTATGCGGAAGCTTTTGATGCCGGTGCTCCTTTGCAGGTTCCCAAATCAGCCGTTCATCCGGACTTTCATGAAGTCTGGCGGGAGATGAC GCCTGAAACCGAAGCGGAGTTCAGCGTCTCCGAAGAACTTGCCACCCGTTTCAACGCCTGGCAGGCCCAGGCCAAGGCCGGCCCCCTGGAAGAGGTGATC CGTCGCGAGACCGCGTTGATCACCGCCTGGCGCATCGACCGCTATGCCGGCGGGCTGCGCAACAAGGCGTTCTTCGCCAATGTCCCGCCGGACATGCCGG AAGCCCAGCAGAAGGCCTGGGAGGCCCTGCACAAGCGGCGTAGCCGGGAGTACGCGGCCGCCCAGCAGGGCGAGCCGCTCCCGCCGATGAGCGCCGCCGA ACAGGCGGAGTGGGATCGCAACGTGGCGCTGATCGGCGGCGAGGACAAACTGCGCGACCTGCGGGTGGAGAAGCAGTTCGATCCGCCGCTGGACCAGCGC CAACTACTCGGCGCCGCCGCCGAGTTCGCCCATGACTACAAGGGCGACTGGGGCGTGCTCGACGACGGCATGACGGTGGGCGGAGTGATCGACCTGCTGC TCGGCGGCACCGTATTCCTGATCAACGAGGAAGACGAAGCCGAGGAATACAGCCAGATCCACCGCGACGGCAGCGCGCGCTACCACCAGTTGTTCAGCGC TCCCGACCGGGTGGCGCCGGGCCAGGAAAAGCTGGTGGCGCTGTTCGATGAACAGGTGCACGACTCCCGCGCCTGGTTCATGAACACTTCGGCGATAGGC CCGCGAGAACCCTTCACCGACTACTTCCGCTATCGCCTGGTGCATTTCGACAACGAGTCGAACAAGCGGCTCTCGGTACTGGCCACCGCCGGGCGGGTGG TAGGCGTAGGGGTGATGCTGGCCAGCGTCGGCCTCAGCGTCAAGCGTCGCGATCCGCGGATGCTGCTCGGGCTGTTCCTGCCATCGCTGGCGCGTCCGCT GCTGAGCGGCAAGGTCGGCCTGCCGGAGATCAGCGCCTTCGACCCGCTGACCGGGATCGCCTTGCCGATGGTCGGCGGGGCGGCGCTGGACAACCTGCGG GCCTTCACCTGCGAGCCTGGCGACAAGGTCGAGCAGATCGGCCAGTTGCCGCCACCGCCGCCGCTGGCGGTCGCGGCGGTGCAATCGCCCGCATTGCAGC AGGTGCTGCTGGCTCAGCAGACCGTGGAGGCGCTCAACGCGCGCGACCTGGGCAGCCTGGCCGGGCTGGTGGCCAAGGCCGAACTCACCCAGGCGCCCGC GGCGGCGACGCCGGCCTGGCTCGCCGAGGCGAAGCAGGCCTTGCAGGACATGGGTACGGAGCAGGCGCAACCGCCGGACCCCGGCTCGGCGCCGGGCTGG CTGCAGCGCGGCAAGGACCTGATGGAATCGCTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCTCGACCGGCGAACGCGGCCGACCTGTCGCCCCGGATCATTCGGTGCGGATGTCGAACCCGCTGCTGGCCTCGCTGACGATACGGAAGCGCGCGTTGC CGTCCGCGGCGATCCGGGTTCTCAGCTCGCGGTTCAGCAGGCCCTTGCCGCAGAGAGTGTCGTCCTGGGTATCGATGCCGATACCGACCACATGCTCGCC CGCCGGCACCTGGAAGCTGGCTTCCTCGCCGACGCCGATGCGCGCGGCGACCTGGCGGTCGATAAGGAACGCCACGTAGCAGCCGCCGCCCAGGTAGCCA TAGTCGCGGTGGACTTCCAGCCGGCCGCCACCGCTCACCGGTTGCTGGTAGCCGAGCAGGCGTTCGGCGGGGATCGCCCGGGTCTTCTCGGCGGGAACCG AGGAACAGCCGGCCAGGAGGAAAAGGATCGCTACGGCGTACATCGGGCGCATGAAGGCTCTCCGTCGAAAGGTTCCCTCAGGCTAGCCCAGTTTCGCTGG
Amino Acid Sequence
>hypothetical protein
MIKNMATNGIAKVLTGGLLENGEKKRRAALEPKLKELEEKLRQRQDSGQKPHILAMRLYIYGFSRGAAEARAFANWLQELTRASGADGRVEYRFAGLPIS IEFLGLFDTVAAVGLADSAPFAAGHMDWADGTMRLPDEAQVQCLPTTLPEDCAFLKRCVHLISCHEQRASFPLDSIRRRDLDANGRRTGPSCYRQGTVEY AYPGVHSDVGGGYGVGNQGKAVGGSEFLLSQIALQHMYAEAFDAGAPLQVPKSAVHPDFHEVWREMTPETEAEFSVSEELATRFNAWQAQAKAGPLEEVI RRETALITAWRIDRYAGGLRNKAFFANVPPDMPEAQQKAWEALHKRRSREYAAAQQGEPLPPMSAAEQAEWDRNVALIGGEDKLRDLRVEKQFDPPLDQR QLLGAAAEFAHDYKGDWGVLDDGMTVGGVIDLLLGGTVFLINEEDEAEEYSQIHRDGSARYHQLFSAPDRVAPGQEKLVALFDEQVHDSRAWFMNTSAIG PREPFTDYFRYRLVHFDNESNKRLSVLATAGRVVGVGVMLASVGLSVKRRDPRMLLGLFLPSLARPLLSGKVGLPEISAFDPLTGIALPMVGGAALDNLR AFTCEPGDKVEQIGQLPPPPPLAVAAVQSPALQQVLLAQQTVEALNARDLGSLAGLVAKAELTQAPAAATPAWLAEAKQALQDMGTEQAQPPDPGSAPGW LQRGKDLMESL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site