Pseudomonas aeruginosa Stone 130, HMPREF1223_11842
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa str. Stone 130 genomic scaffold aczIk-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCATCCGCATTTCGATCCGCACCCGGACCATGTCCGCGCCCAGGAGGCTGTGCGCGAGGCGCTCCAGGGCCTGGACTGGCAGCCGCAGGCATTGTTGCA CTATGCCAATCACCTGCACGACAACGATCGCTGGCCGATGGGCGATGCGCACATGGGGGTCAGCCTGCCACCGCTGACCGAAGAATGCTCGCCGTTGCTG CCATGGACGCTGGCGCTGGAGCGCACGCGCCAGGTGGACAAGGCCATGGCCTTGGGCATGATGCACGACCTGCAACCCAGGCCGCCGTTCAAGCGCCGTC TGCGCCGCCGTCTGCAGGGCTGGCTCGCCGGGCGTCGCTGGCCGGCTTACGGCGAGGACGAGTTCATGCGCAAGGCGGTGCGTCGGCACGAGTTGTTCTG GGTGGAGTCGCTGGATGGGGAGGCGTGATGCTTGGGTCGAGCGTTCGGCAAGGTTCGAGCCGCCATGCTGCTTCGGAGCAGCCGCGAGGATGAAGGTCTG
|
|
| DNA Sequence for Gene |
>HMPREF1223_11842
ATGAAAGTTCTGTTTCTGGTCCAGAAAGAGCAGCGCGCGATCCTGGATCGCCTGTACGACGGCATCGCCGCCCATTGCGAGTGCGATACCCGCTGGCTGA GCAGCGAGGAGCAGGCCGACCTGCGCGGCTACTTCCGCAAGCACGTGGATGTCTCGCGCTACGACCGCATCCTGTTCTTCCTCCGTTTCAAGAAGGAAAT GCGCCAGGTCCGCTTCATCCGCAGCGTGCCCAACCTGGTGATCCTCGAGCACGATGCCTACCAGAACTACATTCCCTGCAAGTACACCGGCAAGTTCAGC GCCCATTACCGGCGCCTGCCCTGGGCACGGGTGATCAGTTCGGGCCATACGGTCAGCGAACGCCTGCGCCAGGAGGGATTCGACGCGGTATTCGTGCCCA AGGGCTACGACCAGACCCTGTTGCATGACCTGGGCCTCGCGCGCGATATCGAGCTGGGCTTCGTCGGCAGTACCGGCAGCGTGGCTTACAGTGGACGCAA GGCGCTGCTCGACGAGTTGGGCGGAGTGGAGAACCTGCTGGTGACCAAGACCAAGTCCGGCGAGGAGTACCTGCGTACGCTCAACCGCATCCGTTTCTTC GTCAGCGCGGATGTCGGCATGGGCGAATACATGATCAAGAATTTCGAGGCGATGGCCTGCGGTTGCGTACTGCTGGCCTACGACCAGGGCGAGCGGGAAA ACGAGGCCTTGGGTTTCCGGGACATGGAGAATATCGTGCTGTATCGCTCGGTGGCGGACATCCAGGAAAAGCTCGCGATCCTGCGCCTCGATACGGCTCT CGCCGAGCGGATCGCGCGAAGCGGCCAGGCGCTGGCCATCGAACGATTCAGCTTCGCCGCTGTCGGTCAGAGTATCGTCGAGGCCATGCGGCCCGCGTTG CGCGAGCCGGAGCGTCCCGGATGGCTGGAGAAGACCTGGCGACGTATTTTTACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GAGTAGCAGCCGAAAAGAGCTGGGGCTTCAGGCGTGTTTGCTATTGTTCAGCTTGTTTTTCCGGGCTGGGGGGAGGTGTAGGACCGATGAAGATCGCAGG ATCGCTCATGCATGTCTGGCGCTTTGAATGGCGACGTGAAGGACAGGTAAGGTTGTAGTTATGGCGCTCGTCGATGATGGTTCGCAGCCATTGGTTTCCG TGATCATCGCTTCCTATAACCACGAAAAGTACATAGAAGCGAGCATTGCCAGCGTGGCTGCGCAGACATACCGCAACGTGGAACTGCTGGTGGTGGACGA TGGTTCCAGCGATGGCAGCGTCGAGCTTTTGCGCGGGCTCCAGGCGAAGTACGGCTTCGACCTCAGGGTCCAGCAGAACCAGGGACTGTCGAGAACGCTC AACGAGGCGATCGCCAGGGCCCGGGGAAATCTCATCGTGCCTTTCGGTTCGGACGACATCATGTTGCCGCAACGCCTGGAGAAACAGGTGGCACACATGT
|
|
| Amino Acid Sequence |
>hypothetical protein
MKVLFLVQKEQRAILDRLYDGIAAHCECDTRWLSSEEQADLRGYFRKHVDVSRYDRILFFLRFKKEMRQVRFIRSVPNLVILEHDAYQNYIPCKYTGKFS AHYRRLPWARVISSGHTVSERLRQEGFDAVFVPKGYDQTLLHDLGLARDIELGFVGSTGSVAYSGRKALLDELGGVENLLVTKTKSGEEYLRTLNRIRFF VSADVGMGEYMIKNFEAMACGCVLLAYDQGERENEALGFRDMENIVLYRSVADIQEKLAILRLDTALAERIARSGQALAIERFSFAAVGQSIVEAMRPAL REPERPGWLEKTWRRIFT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|