Pseudomonas aeruginosa Stone 130, HMPREF1223_10609
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa str. Stone 130 genomic scaffold aczIk-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGCGCAGATCAAGCAACTTATCGAAGGGACGCGCCTGCCCAAGCTGGAAAGCGACGACTACTACAATTTCGTCGACGCCAAGAAGGTCAAGCGGATC GCGGTCAACGACCTGATCCGCGACAAGCTGAGCCGAGGCAGCCTGGCTATCGTCAGCTATGACGGACGCTACGAGATCGTGCCCCGGGATGCGGCGGTGA AGATCCAGGAGCGCGATCCGCGGCGGGTGGTGCTGCTCAACGTACAGAGCCAGGAGCCGGACGAAGACGATCCCTACAAGGACTATGTGGTGCCCGACGA TCTCATGTGGTGAGGCCCGCATCCGGAGTGTCGCTTGACCGGTACGGATGCCGGTCAACTACCAATTCTGGAATGCGAAGCAGTTCTAAAATAACTACCG ATGATTTCGTTTCGATAGCATAATGCCTTTCCTCAGAAATATCCTACGGTTGCCTTTGCGTGCATCTGTGGGCTAGCCGCCTATCGAAAAGGACGTTGGT
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| DNA Sequence for Gene |
>HMPREF1223_10609
ATGCCTTCCTCACAGCTTCCGGGGGCTTCGCCCTCGGAGATCGATCTCGTTCAGCTGTTCCAGCAATTGTGGGCGTCGAAATGGCTGATAGCGCTGATCG CGGCCTTGGCGACCGCCGCTGCGCTCGCCTACGCGCTGTTGGCCGTTCCAACCTACCAGGTGGATGTCCTGTTGCGGCCGATCCAGACCAAGGCCCTGGA GGCTGTCAATGTCAACGGGCTGTATGCCCTGACTCCGCGGGAAGCGCTGGATCGCGTCGGCAACGAGCTGGCAGCCTACTCCGGCAGGCTGGAGTATTTC GAAGCCCATCCAGAGCTATTCCAGCAATTGAACGCCGAGGGTCTGTCCCCCGAGCAGGCTTTCTGGAAGTTCAACCAGGATGCCTTCAGCATGCAGCAGG CGGACTTGAAGAAGGACCCCCAGGCGGCGCCTTTCTTCCGCTTGTCCATGCAGTATCCCCAGGGCATGGATGGTGCCGCCATTCTCAACGGCATGCTCGC GTCGACCATCGAGAACGAGCGCCAGCGAATCCTGGACGACCTCCAGGCACGTATCGACGGTCGCCTGCAATTCCTCGAGCAGGATATCGAAGGCAAGCGT GCCAGTTACCAGGCTACCAAGGAGGGCAAGATCGCCCGGTTGCTGGAAGCGGACAGCATCCGGCGGGCCGGCCTGGAGGATGAGCTCAAGGCGTTGCGCG GGCGGCTGAAGATGGTGCGCGATTCGCGTATCCAGCAGCTCAACGAGGCTATCCAGATCGCCACCCGGCTGGGGATCGTCAAGCCGACGACCCCGGGCGC ACTGGGAGAGGTCGGGCAGGATGGCTCGCGCAGCGTTTTCCGCACCGAGGTGAATAACCAGCAGATACCCCTGTATTTCATGGGTGTCGATGCCTTGACC GCCGAGCGCGATACCTTGCTCAAACGCAAGGGCGATGACTTCACCGAGCCCCGCGTGGCGAAGATCCAGCAGGAGCTGAAGCAGCTGGAGAACAACCGTG AAGTGCAATACCTGCAGGCTCGAAAGGGCGAGGAGCGTTTCTTCGAAAACATCGACAAGCTGCGTGGAGAGCAGGCGCGCCTCAAGACTCTGAAGGCGAG CGAGCTGAAGATCGAACTGGTGCGGATCGACCAGAAGGCTTCGACCCCTCTGAAACCGATCAAGCCGCGCAAGGCCTTGGTGGTGGCCTTGGGTCTCCTG GGCGGGTTGGTGTTCGGCGTGCTGGTGGCTCTGGTTCGGGCAATGTTGCGTGCCCCTCGGCAACGGGTACAGGAAGATAGCCTGCCGCCGGGAGTCGTCA GTCTCGACCGGAGCCTTTCGGGGACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACCAAAGGTGCGCCCCCGAAGTACGCGGGGGCGCATGGTTCAGGCCGATTTACCTATCTGTCGCAGTTCTTCTTCTTTCTCCAGCTTGATCCGATAGGC GTGGGCGTCATCCTCGTTATGGAAGACGCCAACCAGCAGTCCCTGCTGATGCACGTCCCAGCAGCGGCGGCCAAGCGCACGCAGCTCGCGGGATTTGTGG TCATCGTCACGCTCGGTCACTGTCACACTCATCTTTTCTGCTCCAGGGTTGATCTGCATCAAGGCAAATCCAGCCTATTTCAATAGCAGGCTAATCAAAT AGCCCTGGAATTGAGAAAAACCTTTTCAGTTTCCAAGGTGTGAAGATGGCATGCCGGATGCTCTGGAACAGGCCTCTTCCCTCAGGCGTATGCGGCCGAA CAAGGCCGCTTCCGTGAGGGCGGTAATCGCCAACAGGCGATCCAGGCGCAGCAGCAGAGTCGCTCCTTCGACGGCCACCTCAAGGTATTCCTCCTTGCCG
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| Amino Acid Sequence |
>hypothetical protein
MPSSQLPGASPSEIDLVQLFQQLWASKWLIALIAALATAAALAYALLAVPTYQVDVLLRPIQTKALEAVNVNGLYALTPREALDRVGNELAAYSGRLEYF EAHPELFQQLNAEGLSPEQAFWKFNQDAFSMQQADLKKDPQAAPFFRLSMQYPQGMDGAAILNGMLASTIENERQRILDDLQARIDGRLQFLEQDIEGKR ASYQATKEGKIARLLEADSIRRAGLEDELKALRGRLKMVRDSRIQQLNEAIQIATRLGIVKPTTPGALGEVGQDGSRSVFRTEVNNQQIPLYFMGVDALT AERDTLLKRKGDDFTEPRVAKIQQELKQLENNREVQYLQARKGEERFFENIDKLRGEQARLKTLKASELKIELVRIDQKASTPLKPIKPRKALVVALGLL GGLVFGVLVALVRAMLRAPRQRVQEDSLPPGVVSLDRSLSGT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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