Pseudomonas aeruginosa Stone 130, HMPREF1223_07174
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa str. Stone 130 genomic scaffold aczIk-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGGAGCGCGCGACCGCCACCGCCCAGGGCATCGAGCTGGCGTTGCGCGACGCCGGTAGCGGCGAGCTAAGCGTAGAGACCTACGACGCAGTGATCCTGG CCACCGGCTATGAGCGCCAGTTGCACCGCCAACTGCTCGAACCGCTGGCGGAGTACCTCGGCGACCACGAGATCGGCCGCGACTACCGCCTGCAGACCGA CGAGCGCTGCAAGGTGGCGATCTACGCGCAGGGCTTCAGCCAGGCCAGCCATGGCCTCAGCGACACCCTGCTGTCGGTGCTGCCGGTGCGTGCCGAGGAA ATCTCCGGCTCCCTGTACCAGCACCTGAAGCCCGGTACTGCGGCCCGCGCCCTGCACGAGCACGCCCTGGCCAGCTGATCGGCGCCACGCCGCCACGCCC TGTGTTGCCCGTTTCCCCGCCAGGGGATGCCCGGCACGCAGGGCGTTTTCGTTGCATGTCCCGGCCGTTCCGGCCACCACTTTGCAGAGAAACGACATCG
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| DNA Sequence for Gene |
>HMPREF1223_07174
ATGGGGATGCGTACCGTACTGACCGGCCTGGCCGGCATGCTGTTGGGTTCGATGATGCCGGTCCAGGCCGATATGCCGCGGCCGACCGGGCTGGCCGCGG ACATCCGCTGGACCGCCTATGGCGTGCCGCACATCCGGGCCAAGGATGAGCGCGGCCTGGGCTATGGCATCGGCTACGCCTACGCGCGCGACAACGCCTG CCTGCTGGCCGAGGAGATCGTCACCGCGCGCGGCGAGCGGGCGCGCTATTTCGGCAGCGAGGGCAAGTCGTCGGCCGAGCTGGACAACCTGCCGTCCGAC ATCTTCTACGCCTGGCTCAACCAACCCGAGGCGCTGCAAGCCTTCTGGCAGGCGCAGACGCCCGCGGTACGCCAGTTGCTCGAAGGCTACGCCGCCGGTT TCAACCGCTTCCTCCGCGAGGCAGACGGCAAGACCACCAGTTGCCTTGGCCAGCCCTGGCTGCGGGCCATCGCGACCGATGACCTGCTGCGCCTGACCCG GCGCCTGCTGGTCGAAGGCGGGGTCGGCCAGTTCGCCGACGCGCTGGTGGCCGCCGCGCCGCCCGGCACGGAGAAGGTCGCCCTGAGCGGCGAGCAGGCG TTCCAGGTCGCCGAGCAGCGGCGCCAGCGCTTCCGCCTGGAGCGCGGCAGCAACGCCATTGCCGTTGGCAGCGAACGTTCGGCGGACGGCAAGGGCATGC TCCTGGCCAACCCGCACTTCCCCTGGAACGGCGCGATGCGTTTCTACCAGATGCACCTGACCATTCCCGGCCGGCTCGACGTGATGGGGGCCTCGCTGCC CGGCCTGCCGGTGGTCAACATCGGCTTCAGCCGCCACCTGGCCTGGACCCACACGGTGGATACCTCCAGCCACTTCACCCTGTATCGCCTGGCGCTGGAC CCGAAGGACCCGCGGCGCTACCTGGTCGACGGTCGTTCGCTGCCGCTGGAGGAGAAGTCCGTCGCGATCGAGGTACGCGGCGCCGACGGCAAGCTGTCGC GCGTCGAGCACAAGGTCTACCAGTCGATCTACGGCCCGCTGGTGGTCTGGCCCGGCAAGCTGGACTGGAACCGCAGCGAGGCCTATGCGCTGCGTGACGC CAACCTGGAGAACACCCGGGTACTGCAGCAGTGGTACTCGATCAACCAGGCCAGCGACGTCGCCGATCTGCGTCGGCGCGTCGAGGCGCTACAGGGCATC CCCTGGGTCAACACCCTGGCCGCGGACGAGCAGGGCAACGCCCTGTACATGAACCAGTCGGTGGTGCCCTACCTGAAGCCGGAACTGATTCCCGCCTGCG CCATTCCGCAACTGGTCGCCGAAGGCCTGCCGGCCCTCCAGGGGCAGGACAGCCGCTGTGCCTGGAGTCGCGACCCGGCCGCGGCCCAGGCTGGCATCAC CCCGGCGGCGCAACTGCCGGTGCTGTTGCGCAGGGACTTCGTGCAGAACTCCAACGACAGCGCCTGGCTGACCAACCCGGCGAGCCCGCTGCAGGGCTTC TCGCCCCTGGTCAGCCAGGAGAAGCCCATCGGTCCGCGGGCGCGCTACGCCCTGAGCCGGCTACAGGGCAAGCAGCCGCTGGAGGCGAAGACGCTCGAGG AGATGGTCACCGCCAACCATGTCTTCAGCGCCGACCAGGTGCTGCCGGACCTGCTCCGCCTGTGCCGCGACAACCAGGGCGAGAATTCCCTTGCCCGTGC CTGCGCGGCCCTGGTGCAGTGGGACCGTGGCGCCAACCTCGACAGTGGCAGCGGCTTCGTCTACTTCCAGCGCTTCATGCAACGCTTCGCCGAACTCGAC GGCGCGTGGAAGGAACCGTTCGATGCGCAACGTCCCCTGGATACGCCGCAAGGCATCGCCCTCGACCGGCCGCAGGTGGCGACCCAGGTGCGCCAGGCGC TGGCGGACGCGGCGGCGGAGGTGGAGAAGAGCGGGATTCCCGACGGCGCGCGCTGGGGCGACCTGCAAGTGAGCACCCGTGGCCAGGAACGCATCGCGAT TCCCGGCGGCGATGGCCATTTCGGGGTCTACAACGCGATCCAGAGCGTCCGCAAGGGCGACCACCTGGAGGTGGTCGGCGGCACCAGCTACATCCAGCTG GTGACCTTCCCCGAGGAAGGGCCCAAGGCTCGCGGGTTGCTGGCTTTCTCCCAGTCCAGCGATCCGCGCTCGCCGCACTACCGCGACCAGACCGAGCTGT TTTCCCGCCAGCAATGGCAGACCTTGCCGTTCAGCGACAGGCAGATCGACGCCGACCCGCAACTGCAACGGCTAAGCATTCGCGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAAGCAATGCCTATCAGATCTGATGGGAAAAAAACTGACGGTTTTTCCGCGCTCGTTCGTCTTTAACCATAGAGGCGGCCCACAGCCGCCCGGTTCCAGG GAACACGTGCAGGCAGCGAGCAGGGATGCTCGGCTTCGGCGGGGACCCGCTACCCACTCGTCCACGAAAGGAGCGTCACGATGACCCATTCGCCCGTCAA ACAGATGTTGAAGGAGGCCGGCCTGAAGATGAGCCTGGCCCGGCTGAAAGTGATCGATGCGCTCTGGGAAGCCTCGGGGGAGCAGGGCCGGGTGCCGATC CGCACCCTGCACCGGCGTCTCTCCGAAACCGGTACGCCGCTGTCCCTGGTGAGCATCCGCCAGGTCCTCGGGCGCCTGGTGGAAAGCGGCCTGGTGACCC TCGACGAACAGGATGTCTACAGCCCCGGCAAGGCTTCCTGGGGCGGTGCCGCCGGTTCCGCGGCGCCCGAGCGCCGCGCCGCGGCCAACGAGCAGCGGCT
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| Amino Acid Sequence |
>acyl-homoserine lactone acylase pvdQ
MGMRTVLTGLAGMLLGSMMPVQADMPRPTGLAADIRWTAYGVPHIRAKDERGLGYGIGYAYARDNACLLAEEIVTARGERARYFGSEGKSSAELDNLPSD IFYAWLNQPEALQAFWQAQTPAVRQLLEGYAAGFNRFLREADGKTTSCLGQPWLRAIATDDLLRLTRRLLVEGGVGQFADALVAAAPPGTEKVALSGEQA FQVAEQRRQRFRLERGSNAIAVGSERSADGKGMLLANPHFPWNGAMRFYQMHLTIPGRLDVMGASLPGLPVVNIGFSRHLAWTHTVDTSSHFTLYRLALD PKDPRRYLVDGRSLPLEEKSVAIEVRGADGKLSRVEHKVYQSIYGPLVVWPGKLDWNRSEAYALRDANLENTRVLQQWYSINQASDVADLRRRVEALQGI PWVNTLAADEQGNALYMNQSVVPYLKPELIPACAIPQLVAEGLPALQGQDSRCAWSRDPAAAQAGITPAAQLPVLLRRDFVQNSNDSAWLTNPASPLQGF SPLVSQEKPIGPRARYALSRLQGKQPLEAKTLEEMVTANHVFSADQVLPDLLRLCRDNQGENSLARACAALVQWDRGANLDSGSGFVYFQRFMQRFAELD GAWKEPFDAQRPLDTPQGIALDRPQVATQVRQALADAAAEVEKSGIPDGARWGDLQVSTRGQERIAIPGGDGHFGVYNAIQSVRKGDHLEVVGGTSYIQL VTFPEEGPKARGLLAFSQSSDPRSPHYRDQTELFSRQQWQTLPFSDRQIDADPQLQRLSIRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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