Pseudomonas sp. GM41(2012), PMI27_005924

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM41(2012) ctg12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGTTCGAGATTCTGTACGCCCGTCACCGCCAAGGGCTCTACCGATTCCTGCTCGGCCTGAGCGGCAAGTCCGAGTTGGCCGAAGAGGTTTACCAGGACA CCTGGCTGAGCCTGATCCGCAGCACCAGTCAGCCACAAGGCCGGGCGAACTTTCGCACCTGGCTCTATCAGATTGCCCGCAATCGACTGATCGATCACTG GCGCAAACACGGAATCCACAACCCCTTGCACGACAGCTATGACGAACAGATCCACGCCCTGAGCGATGACGCTGCCGATCCCGAACAACTGCTGAGCCTG AGCCGCGACAGCCAGCGCCTCGAAGCGGCCCTGCAAAACCTGCCCGCTGACCAGCGCGAAGTGTTCCTGCTGCGCGCCCACGGCGATCTCGACCTGTCGC AGATCGCCACCCTCACCGAAACACCGCTGGAAACCGTCAAAAGCCGCTTGCGCTACGCCCAGCAAAAACTGCGTCGGCTGCTGGCCGAGGAGGTACTGAC
DNA Sequence for Gene
>PMI27_005924
ATGACTGACGCCCGTCCTACGCCAGAAGACGAAGTGTTGAAGCACTATCGTGAACACGCGACCGGCGAACCACCGGCCCATCTCGACGCGTTCCTCCTGG CTACCGCACAGCGTGAAGTCCCTGCGCAGAAGCCAGGTCTGTGGAAACGCTGGGTCCAGGCCTGCCAGAAACCCCGTTGGCAAGTTGCATTTGCCAGCCT CGTCGGCGTGGCCCTGATGCTTGCACTGGTGCAACGCACGGAGGAGCAACTGCCGAGTTACGACTTCGCGCCTGCCCCTAAGGCATCTGCACCGGCCGCC AAAAAAGAAGCACCGTCATCGGTTGCGCGTTCTCTGGCTGCCCCGGCCAGCGCCATGTCCGCCCCCGCGCCTGCGGCTCCAATGGCCGATCTTGCTGCCC CAGCGCAGAGCGAATCGATCAGCGCTGAAATGGCTGACGAAGCGAAGGTCAGCAAACGCTCGGCGATAGCTCCGGCAAAGTCTATCGACGATCAATTAAG GGAAGTGATCCGCCTGCAAAAGGCTGGTCAGGCTCAAGCGGCTGCTGACCTGATGGCGACATTGCACAAACGCTTTCCCAAGGAAAATCTCACGGCCAGA CTCAAGGATTTGCAGAAAAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGGCAGAGCGGTCAGTCATTTGGCATCGACACCCGAAAGCGCGCACTATCGGCCTATAGCCGATGCGTTGGAGGAAGCCATGGCAAAAAAAATCGACCG CATCGCCCAAATGCTCAACTGCCCGGTGAAGGGTCAGGAATTACGGCGCGCGGTGACTGAGAGTCGTAAGGAGTTTCTGCTGGCGAAGCAGGAAGAGGAA GCGTTTGAGGAAAACGTTCTTGATGATGAAGTGGTCGAGGACGACGAGGATGATGAATACGACGAGTTTGATTGGACGACAGAATGAAAAAACCGCTTCG GCGGTTTTTTTGTGCATCGTCTATCAGCGACAGTAGTTCGGGATTACCGAACAACTGAAATTCTTACCAACATCGCCCGAGGGGCCGGGGAGATTGACCA AAAAAATGCCGACTACCCAAGAAACGCCCAAGAAATATAGGAACGCCAGCGGGCGCCTGAGTCTGACGCGTGCGCTCAATTCGAACAGTCAAGTTTTCCT
Amino Acid Sequence
>hypothetical protein
MTDARPTPEDEVLKHYREHATGEPPAHLDAFLLATAQREVPAQKPGLWKRWVQACQKPRWQVAFASLVGVALMLALVQRTEEQLPSYDFAPAPKASAPAA KKEAPSSVARSLAAPASAMSAPAPAAPMADLAAPAQSESISAEMADEAKVSKRSAIAPAKSIDDQLREVIRLQKAGQAQAAADLMATLHKRFPKENLTAR LKDLQKN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site