Pseudomonas sp. GM41(2012), PMI27_002454

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM41(2012) ctg2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGGCAGGTCTGGGTCTGGATCAAGGACAAACAACTCAATAAAGACAAACTCAAGGAACTGCGCGCCAACTCGCCGTTGGGCGAGATCCTGGCCGCTGGCC TGGCCAACTCCAGGCATGGTCGCGAGATCATGAAAGAGTGCATCGAAGAGGCCGCCGCGCGGGTCATCCACGAGCTCGAACGCTACATCAACGCGTTGGG CACCATCGCCGCCATGGCCCCGTTGCTGGGTCTGCTGGGTACGGTGCTGGGCATGATCGACATTTTCAGCGCGTTCATGGGCACGGGCATGGGTACCAAT GCTGCGGTGCTGGCTGGCGGTATTTCCAAAGCGTTGATCACCACGGCCGCGGGCCTGATGGTCGGTATCCCGGCGGTATTCTTCCACCGGTTCCTGCAAC GCCGGATCGATGAACTGGTGGTGGGCATGGAGCAGGAAGCGATCAAACTGGTCGAGGTGGTACAGGGTGACCGTGATGTCGACCTGAATGGGGGCAAAGT
DNA Sequence for Gene
>PMI27_002454
GTGAAATTCCGCCGTAAACCGCGGGAAACGGTAGACATCAACCTCGCGTCGCTCATTGACGTGGTGTTCATCCTGCTGCTGTTTTTCGTGGTCACCACCA CGTTTACCCGTGAAACCCAGTTGCGCGTTGATCTGCCGGAAGCGGTCAGTGGTTCCCCTGCCGAAGACCAGCAAGTCAAACACCTGGACGTTGCCATCAG TGCCGAAGGCGCCTTCTCGGTGAATAATCAGGTATTGCCCAAGAACGACCTGGCGACCCTGATGGACGCGCTGCAGAAAGAATCCAGTGGCGACACCAAC CTGCCGCTGTCCATCAGCGCCGACGGCAAGACCCAGCATCAGTCCGTCATCACCGCCATGGACGCCGCCGGTAAACTCGGTTTCAGCCACCTGCGCATGA CCACTGTCGAGGCGGCGCCGCCCGCGCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGCCATGTCCGATCGCTTGCTCGCCGCGTGGTACCAAGGCCATCCGGCCCTGAAGCTGTTACAGCCGCTGGAGTGGCTGTATCGGCGCGTGGTCATGAA CAAGCGCAGGCGTTTTCTGGCGGGAGAGGGCGAGATCTATCAACCGCCGGTGCCGCTGATCGTCGTGGGTAATATCACCGTCGGCGGCACTGGCAAGACG CCGCTGATTCTGTGGATGATCCAGCACTGCCAGCGCAGCGGTTTGCGGGTCGGCGTGGTCAGTCGGGGTTATGGCGCCAAGCCGCCGCAATTGCCGTGGC GAGTCGAGGCGGATCAAAGCGCCGAGATCGCCGGCGACGAACCGCTGTTGATCGTCCAGCGCACCGGCGTTCCGTTGATGATCGACCCGGACCGCAGCAG CGCCGTCAAAGCCCTGCTGGCGAGTGAACCACTGGACTTGATCCTGTCCGACGACGGCATGCAGCATTATCGACTGGCCCGCGACCTTGAACTGGTGTTG
Amino Acid Sequence
>biopolymer transporter ExbD
MKFRRKPRETVDINLASLIDVVFILLLFFVVTTTFTRETQLRVDLPEAVSGSPAEDQQVKHLDVAISAEGAFSVNNQVLPKNDLATLMDALQKESSGDTN LPLSISADGKTQHQSVITAMDAAGKLGFSHLRMTTVEAAPPAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site