Pseudomonas sp. GM41(2012), PMI27_002323
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM41(2012) ctg2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCAGGGAGTCTTCGGTCAATTTCAAGGTTTCGCGGGCACGCATCAGACTGTCGTGGATTTGCTCGCGCAGCTCATCAGCCTGATCGCCGGCCAGCGTTG CAGTGTGTTCCAGCAACCGTTCGGTGTCGCTGACCAGAGTCTGAAAATCATTCATCAGGATTTCTTGAGCAGTCTTTGCCTTGATGCTGGCCATGGGTGG ATCTCCGTAAGTGGCTTCTGAAACGTTCGAGTATGAGCCTTGCGCGAAGGTTCAGTACAAATGACTGGTACAACTTTTGCTACGTCGTGGTGCGTCTGCC TGCGCCGTTGCGCTGTTGCCGGGCAGGATTCGAGTAAAACCTTATCTCAAATAATCAAAACTCGCGCAAAGGTTCCAACCTTGTGCGCCAAACTGGCTCA TCGGGATCAATCTGCTGATCCCGGCAAGTCGCAACTTGGTGCATGAATTGTCTGCGCGAACTGCTTTGGTGCTTTTTTAGCCTTCAGGTCTGCCAACCCC
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| DNA Sequence for Gene |
>PMI27_002323
ATGGAAAATCTGCAAAGCGCTGTGGACAGTCTGGTCCATAGCTCCAATACGTTGTTCATTCTGATCGGCGCGGTCATGGTGCTGGCGATGCACGCCGGTT TCGCCTTTCTTGAAGTCGGCACGGTTCGACAAAAGAACCAGGTCAATGCCTTGTCGAAGATTCTCAGCGACTTCGCCATTTCGACCCTGGCCTACTTCTT TATAGGCTATTGGATTTCCTATGGGGTGACCTTCATGCAACCGGCGGCGGTGATCAATGCTGATCATGGCTATGGGCTGGTGAAGTTTTTCTTCCTGCTG ACCTTTGCTGCGGCGATACCCGCGATCATTTCCGGCGGCATCGCCGAGCGTGCCCGGTTTGTCCCGCAATTGTGCGCGACGGCACTGATCGTGGCGTTCA TCTATCCGTTCTTCGAGGGCATGATCTGGAACGGCAACTTTGGCCTGCAAGCCTGGTTGCTGCAGCACTTTGGTGCCAGCTTCCATGATTTCGCCGGCTC GGTAGTGGTCCACGCCATGGGCGGTTGGCTGGCGCTGGCCGCGGTGTTGTTGCTCGGGCCGCGCAATGGTCGTTATCGCGAAGGGCGACTGGTGGCGTTC GCGCCCTCGAGCATTCCCTTTTTGGCGCTGGGGTCGTGGATCCTGATCGTTGGCTGGTTCGGTTTCAACGTGATGAGCGCGCAAACCCTGCAAGGTGTCA GCGGACTGGTGGCGGTGAACTCGCTGATGGCCATGGTCGGCGGTACCGTGGCGGCGCTGGTCGTCGGGCGCAATGACCCGGGCTTTCTGCATAACGGCCC GTTGGCCGGGCTGGTGGCGATCTGTGCCGGTTCCGATCTGATGCACCCGGTGGGCGCGCTGATCACTGGCGTTATCGCCGGCGCACTGTTTGTCTGGTGC TTCACTGCGGCTCAAGTCAAATGGCGCATCGACGATGTGTTGGGGGTTTGGCCATTGCATGGTTTGTGTGGCGTCTGGGGCGGAATCGCCTGCGGCATTT TTGGCCAGAGCGCGTTGGGTGGGCTGGGCGGCGTGAGTCTGATCAGCCAGTTGATCGGCACTGCGTTGGGGGTGGTTGTGGCGCTGGCGGGTGGCTTTGC CGTGTATGGCACGATCAAGGCGTTCCATGGTCTGCGTCTGAGTCAGGAAGAAGAGTATTACGGCGCTGACTTGTCGGTGCACAAGATTGGCGCTGTGAGC CAGGACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCTCTTCGTCGTCAGCGCCAGGATAGAAACCGTGCAGCAGGCGATAGCGGTCGTGCCGTATCTGGTCGGCCCGCTCCTGTACCTGATACGCGGGTAATC CCAGCATGATCAGCGCGTGGGAGGCGAGCATCAGGCTCGACTCCAGCAGTTCAGGCACGACTTCGCTGGCGCCTGCTGCCTTCAACTCGGCCAGCTGGCT GTCGTCGCGCGTGCGCACCAGAATCGGCACGGTCGCGTTGAGTCGCCGCGCTTCCTTGAGGATCAGCAACGCGATGTCGGCCTGATCCACGGCGATCACC AACAGCCTGGCGCGCTCCAGTCCTATCGCGACCAGCAGTTCACCGCGACGTGAGTCGCCATAATGCACGCAGGTTTCACTAACGGCGGCTTCGTGGACAC GCACCGGATCAGTATCCAGTGCGATGTAGGGTTGTTGCGCGTTGCGTAGTGCGCGTCCGATTGACTGACCTACACGACCGTAGCCACATATAACGACATG
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| Amino Acid Sequence |
>ammonium transporter
MENLQSAVDSLVHSSNTLFILIGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAISTLAYFFIGYWISYGVTFMQPAAVINADHGYGLVKFFFLL TFAAAIPAIISGGIAERARFVPQLCATALIVAFIYPFFEGMIWNGNFGLQAWLLQHFGASFHDFAGSVVVHAMGGWLALAAVLLLGPRNGRYREGRLVAF APSSIPFLALGSWILIVGWFGFNVMSAQTLQGVSGLVAVNSLMAMVGGTVAALVVGRNDPGFLHNGPLAGLVAICAGSDLMHPVGALITGVIAGALFVWC FTAAQVKWRIDDVLGVWPLHGLCGVWGGIACGIFGQSALGGLGGVSLISQLIGTALGVVVALAGGFAVYGTIKAFHGLRLSQEEEYYGADLSVHKIGAVS QD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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