Pseudomonas sp. GM41(2012), PMI27_002141

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM41(2012) ctg2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACCTGGCAGGAATGTTCTGTTTTTAACCCTGGCTTCTATTTATGCCTATCAAGTAGGCGCTGAAGTTGTCATCACAGGTGTGTGTGAAACAGAGAGCTC TGGTTACCCGGATTGTGGTGATGAGTTTGTTAAGGTGTTGAACAGCGCCATTCAGTTGGGCATGGACTATAAGGTACGAATCGAAACGCCGCTTATGCGG CTGAATAAAGCTGAGACCTGGGCCTTGGCTGATTACCATAAGCAGCTGGATTTGGTTCGTTACCACACGTTGACTTGTTACAACGGAATAATGGGAAGTG GGTGTGGTGACTGTGATGCATGTGCTCTTCGTGCGAAAGGATTGAGTGAGTTTCTCGAAAGCAGAGTGAAGGTTTTGAATAGTCTGAAAATCAAACTAAA ACGATAAAAGTAATTTGCTGCGAGTAGGGGGGACTAATCCCATTGCCTTCAGTTAATAGGAAGCATTACTATTCACGCCCCGTTTTCACAGCACACCGCA
DNA Sequence for Gene
>PMI27_002141
ATGACCCCCAAGCTGCCCCGCAGACACGGCTTTTTCGAGCATTACGAAGAGTTGGTCGGGACCTGGACCCGTCGCCTGAGAAATCGTCAGCAGGCCGAGG ACCTGGCCCACGACACCTTCGTGAGGGTGCTTGAGTCCGATTCGGCGACGGTTGCACAACCTCGGGCGTATTTGCACCAGACCGCGCGCAACATCGCGGT GGATGGTTATCGGCGGGAGGATCGGCGGGGCGCCATGGAGTCGGAGGCGATCGATCACAGTGTGTCGTCGTCCGGCGACCCGGAGCATTTCATGCAGGCG ATCCAGTTGGCTGACTCCATCGAACGGGCGCTCACCGAGTTGCCGGTCAACTGCCGCAAGGTGTTTGTCTGGCAGAAGATCGAAGGCCTGACCCAGGCCG AAATCGCCGAACGCCTGGGTCTGTCCAAGAACATGGTGGAAAAGTATATGATCCGCACGCTGCGGCATCTGCGCGACCGTCTTGACGGATTGCAGCCATG A
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCGGTGCCTTTTCATCCCCAGCCAAACCGGAACTTCCATGATGGATACTCGTGATTGTGCGTGCGGGCAAACAACGGTTCGCGACGAGGCGGCGCGG TGGTTTGTGCGTTTGCAGGAACCTGCGATCAATGCCGAAGAGTCACGGCATTTCGAAGCCTGGCTGGACGAACACCCTCAGCATCGCGATGAATTCCAGT TGCTCCAGGGCTTGTGGTCGGCGGCAGATTTGCTGCCGGCGGCGCGTCTGCAAGCCTTGTGTGAAACCCCTCCGGCACGCAGCAAACGTCGCCCGCTGGT GCGTTATGCAGTGGCCGCCAGTGTGTTGGCCGTCGCGCTCGGGCTGGGGTTGTTCAGCGGTTTGAATCACCCGGCGATCTATACCGCCGAATTTTCCACA GCCTTGGGCGAACGACGTCATGTGGCGTTGCCGGACGGTTCGGTGATCGACTTGAACAGTCGCAGCCGCGTTCAGGTGCGCTATGAAAACGACCGCCGCA
Amino Acid Sequence
>RNA polymerase subunit sigma-24
MTPKLPRRHGFFEHYEELVGTWTRRLRNRQQAEDLAHDTFVRVLESDSATVAQPRAYLHQTARNIAVDGYRREDRRGAMESEAIDHSVSSSGDPEHFMQA IQLADSIERALTELPVNCRKVFVWQKIEGLTQAEIAERLGLSKNMVEKYMIRTLRHLRDRLDGLQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site