Pseudomonas sp. GM41(2012), PMI27_001507

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM41(2012) ctg2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGCTGGGTGTCGATCGCCCGCAACACCCCGTCGCTGTTCCAGATCTACGTCCTCTACTTCGGCCTCGGCTCGCTCGACTTGCATGTCAGCTCATGGTTC GCGCTGTTGGCCGGGATCACTTTCAACAACGCCGGTTACCTGGCGGAAAACTTTCGCGGCGGCCTCAAGGCTGTGCCCGGCACGCAGGTGCGCGCGGCGC GTTCGCTGGGCATGAGTGCCTTCCAGGCTTACCGGATGATCATCGTCCCGCAGCTGCTGCGGATCGTCTTCTACCCGTTGAGTAACCAGATGGTCTGGGC GGTGCTGATGACGTCCCTGGGGGTGATCGTCGGGCTGAACAATGACCTGACCGGCGTGACCCAGGATTACAACGTCAAGACGTTCCGCACCTTCGAATAC TTCGCCATCGCCGCGGCGCTGTATTACCTGATTGCCAAGGCGATCGTCGCCGTCGCCCGGCTGATGGCCTGGCGACTGTTCCGCTACTGAGGAGGTGAGC
DNA Sequence for Gene
>PMI27_001507
ATGTTGACCACCAGTTTTTCCTGGAATGACCTGTTGTTCTTGCTTGATGGCGCCTGGGTCACTCTGAAACTCACGTTCTGGTCGATCATCCTCGGCTCCT TCGCCGGGCTGTTGTTCGGCTTGTTGCGGGCGCTGTTGCCGCGCGCCAGCCTGCCACTGGCGTGGGTGCTGGACGTGTTTCGCAGCGTGCCGTTGCTGAT CCAGTTTGTGTTGTTCAACTCGCTGAAAAGCATCGTCGGCTTGAACATCAGCGCCTTCAGCGTCGGCTGCATTGTGCTCGGGGTCTATGCCGCCGCGTAC TTCACCGAGATCGTGCGCAGCGGCGTGCTGTCAGTGCCGTTCACCGTGCGCCGGGCCAGTCGCTCGCTGGGCCTGAGTTTCCTGCAGGACCTGCGCTGGA TCGTCCTGCCGATGGCCACGCGGGTGGCCTTTCCCGGCTGGCTGAACCTGGTGCTCAGCGTGATGAAAGACACCGCGCTGGTGATGTGGATCGGCATCGT CGAACTGCTGCGCGCCTCGCAAACCATCGTGACCCGCATTCAGGAACCGCTGCTGGTGCTGTGCATCGCGGGCCTCATCTACTACGTCATGAGCCTGGTG GTCGCTCGCCTCGGCGCTCGTCTGGAAAGAAGGTGGCAAGAAAATGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCGACAACGTACACAAATCCTTCGGCAACCTCGAAGTGGTCAAGGGCGTCAACCTGACGGTGAACAAGGGCGAGGTGGTGTCGATCATCGGCGGCTCC GGCTCGGGCAAGTCGACCCTGCTGATGTGCATCAACGGCCTGGAGCCGATCCAGAAAGGCAACATCCGCGTCGACGGTGTCGAGGTCCATCACAGCGCCA CCGACCTCAACCGTCTGCGGCAGAAGATCGGCATCGTCTTCCAGCAATGGAACGCGTTCCCGCACCTGACCGTGCTGGAAAACGTGATGCTGGCGCCGCG CAAAGTGCTGGGCAAGAGCAAGGCCGAAGCCGAGGAACTGGCGGTGAAACAACTGACCCACGTCGGTCTGGGCGACAAGCTCAAGGCCTTTCCCGGCAAG CTCTCCGGCGGCCAGCAACAGCGCATGGCGATCGCCCGCGCCCTGGCCATGTCGCCGGACTACATGCTGTTCGACGAAGCCACTTCGGCCCTCGACCCGC
Amino Acid Sequence
>amino acid ABC transporter
MLTTSFSWNDLLFLLDGAWVTLKLTFWSIILGSFAGLLFGLLRALLPRASLPLAWVLDVFRSVPLLIQFVLFNSLKSIVGLNISAFSVGCIVLGVYAAAY FTEIVRSGVLSVPFTVRRASRSLGLSFLQDLRWIVLPMATRVAFPGWLNLVLSVMKDTALVMWIGIVELLRASQTIVTRIQEPLLVLCIAGLIYYVMSLV VARLGARLERRWQEND
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site