Pseudomonas sp. GM41(2012), PMI27_001258
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM41(2012) ctg2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAATTAACGTGCCGGTTACCCCGTTTGCGCATCGGGCAGTTCCACAAAAACTTTGCAACCAACTGATGTTTATCAGTTTTATTTATATAGCCGATGAGT CATCGGTTACTTGCGTTTTCACTCAGGCCAAATGCCAGGCAAGTTGTCCGAACAGTCAGGACTCAATCTGGTGCACACCACTTTTTTTCAACGTCGCGCA TCAACCATAGACCATCCTCAAACGGCTGATTTCACATAAGAAATCTTGTCTATTTTTACAACCTGTCAAGTGCGTCAAAATGGTGAGAGGCCTCACCATT TTGGTGATTTTCAGTTTTAAACGTTAATTATCAATAACTTAATAAAGTTATAAGCTTATAAAAAATATTCTTGCTCAATCCTCAAACTCAGACTAGCGTT TATTCCTGACAGCGCTGACAGGAATACACCTGTTTGCGCAGGCTTCATATAAAACATTTAGAACCGACACTAGTCGGTCATTGCCTGCGAGGAACTCGGA
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| DNA Sequence for Gene |
>PMI27_001258
ATGTCTCTGTTGATCCGTGGCGCCACCGTTATTACCCATGATGAAAGTTATCGCGCCGACGTCTATTGCGCCGACGGCGTGATCAAAGCCATCGGCGAAA ATCTTGATGTTCCGGCGGGTGCCGAAGTGCTCGACGGCAGCGGCCAATACCTGATGCCCGGCGGCATCGATCCGCACACACACATGCAACTGCCCTTCAT GGGCACGGTGGCCAGTGAAGACTTCTTCAGCGGCACTGCGGCGGGACTTGCCGGTGGCACGACGTCGATCATCGACTTTGTGATCCCCAATCCGCAGCAA TCCTTGATGGAAGCCTTTCACCAGTGGCGCGGCTGGGCCGAGAAGTCGGCGTCGGATTACGGTTTCCACGTCGCGATTACCTGGTGGAGCGAACAGGTGC GCGAGGAAATGGCCGAGCTGGTCAGCCAGCACGGGGTCAACAGCTTCAAGCACTTCATGGCCTACAAGAACGCGATCATGGCCGCCGACGACACCCTAGT GGCGAGTTTCGAGCGCTGCCTGGAGTTGGGCGCGGTGCCGACCGTGCATGCGGAAAACGGTGAGCTGGTCTATCACCTGCAACGCAAATTGATGGCCCAA GGCATGACCGGGCCGGAAGCGCATCCGTTGTCGCGCCCTTCGCAGGTGGAAGGTGAAGCGGCCAGTCGGGCGATCCGCATCGCCGAAACCCTGGGCACAC CGCTGTACCTGGTGCACGTCTCGACCAAGGAAGCCCTCGACGAAATCACCTACGCCCGCAGCAAGGGCCAACAAGTCTACGGCGAAGTCCTGGCCGGACA TTTGCTGCTGGACGACAGCGTCTACCAACACCCGGACTGGCAGACCGCCGCCGGTTACGTGATGAGCCCGCCCTTCCGTCCTCGCGGCCATCAGGAAGCG CTTTGGCACGGTCTGCAATCGGGCAACTTGCACACCACCGCCACCGACCACTGCTGCTTCTGCGCCGAACAAAAAGCGGCTGGCCGTGACGATTTCAGCA AGATCCCCAACGGCACGGCCGGTATCGAAGACCGCATGGCGGTGCTCTGGGATGAAGGGGTGAACACCGGGCGTTTGTCGATGCAGCACTTCGTGGCGCT TACCTCCACCAACACCGCGAAAATCTTCAACCTCTACCCGCGCAAAGGCGCGATTCGCGTCGGTGCCGATGCGGACCTGGTGCTGTGGGATCCGGAAGGT ACGCGGACGATTTCAGCGCAGACTCACCATCAGCAAGTGGACTTCAACATCTTCGAAGGCAAGACCGTGCGCGGTGTACCGAGCCACACCGTCAGCCAGG GCCGGGTGGTATGGGCTGATGGTGATTTGCGCGCCGAGCGCGGTGCCGGACGGTATGTCGAACGGCCGGCGTATCCGGCGGTGTTTGATTTGCTGAGCAA GCGGGCTGAGTTGAACAAGCCGACTGCTGTGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGCGGCCTTCGGCCTATCGCGGGCAAGCCTTGCTCCTACAGACGTTGCGCAAATCCTGTAGGAGCATGGCTTGCCCGCGATGGCGGCAGTCCTGACAAC ACAAAAACCAATGCCCATCAGAGGCAGCACCTCAAATAACCGTGAGGCCAACACCGTGATCAAGACCCTGAACCACCTCCCGCATCCGCACGAGAATGCG GCCGCCCTCGCCGGCCATTTCACCGATCTGGCGCCACCGCTCAACGACCGCCAGGCCCATCTGGAAGCCTCTCGCTGTCTGTATTGCTACGACGCGCCGT GCGTGAATGCCTGTCCGAGCGAGATCGATATTCCGTCGTTCATCCGCAATATCCATCAGGAAAACGTTCAGGGCGCCGCACAGAAAATCCTCTCGGCGAA CATCCTCGGCGGCAGTTGCGCGCGGGTGTGCCCGACGGAAGTGCTTTGCCAGCAAGCCTGCGTGCGCAACAACGACCATGAATGCGCACCGGTGCTGATC
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| Amino Acid Sequence |
>phenylhydantoinase
MSLLIRGATVITHDESYRADVYCADGVIKAIGENLDVPAGAEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPQQ SLMEAFHQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVSQHGVNSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLMAQ GMTGPEAHPLSRPSQVEGEAASRAIRIAETLGTPLYLVHVSTKEALDEITYARSKGQQVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQEA LWHGLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNTGRLSMQHFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPEG TRTISAQTHHQQVDFNIFEGKTVRGVPSHTVSQGRVVWADGDLRAERGAGRYVERPAYPAVFDLLSKRAELNKPTAVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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