Pseudomonas sp. GM41(2012), PMI27_001040

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_001040
NCBI Locus Tag	PMI27_RS21830
Name
Replicon	ctg2
Genomic location	871129 - 873120 (+ strand)

Cross-References

RefSeq	WP_008155318.1
GI	495430623
INSDC	EUB74864.1
NCBI Locus Tag	PMI27_RS21830
NCBI Old Locus Tag	PMI27_001040
UniParc	UPI0002701A35
UniProtKB Acc	W6VPQ1
UniProtKB ID	W6VPQ1_9PSED
UniRef100	UniRef100_W6VPQ1
UniRef50	UniRef50_O52325
UniRef90	UniRef90_Q4KC82

Product

Feature Type	CDS
Coding Frame	1
Product Name	bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.39
Kyte-Doolittle Hydrophobicity Value	-0.225
Molecular Weight (kDa)	73.9
Isoelectric Point (pI)	6.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002112 (427 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_001040 Search term: bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000283148 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 1.3e-26 Percent Identity: 25.7
Ensembl 110, assembly GRCh38.p14	ENSP00000387019 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 1.3e-26 Percent Identity: 25.7

References