Pseudomonas sp. GM41(2012), PMI27_000875

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM41(2012) ctg2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGTCGACAACCAGGTCAACCCGAAAACCGGCACCATCCGCGGTCGTGCCGTGTTCGACAACAGCGACGGCGCCTACACCCCAGGCCTGTATGCCCGTCT GAAACTGGTCGGCAGCGGCACCTATTCCGCCGTGCTGATCAACGACGAAGCGGTCGGTACCGATCTGGGTAAAAAGTTTGTGCTGGTGATGGATGCCGAC AACAAGACTGTTTACCGCTCGGTCGAGCTGGGTCCGAAGATCGAAGGTTTGCGCATCGTGCGCAGCGGCCTGAACAAGGACGACACCGTCATCGTCAAGG GTCTGCAACGGGTTCGCCCTGGTTCGCCGGTCACCCCTGAAGTGATCCCGATGGCCAGCGAACAAACTCTCGCGGCACTTGCACAACAACGACAAGCGCT GGAAGCCAGCAACCTGCCCCAAGTCGCCCCTGCCAAGGTCGCGCCGGGTTCGGTTGTGAAACTGGCTGCTGCGACTCCACGCGGTTAAGGGATCTCTACG
DNA Sequence for Gene
>PMI27_000875
ATGAATTTTTCCCAATTCTTCATTTCACGGCCGATCTTTGCAGCGGTACTTTCGCTGCTGATCCTGATCGCCGGCGCCATCTCGCTGTTCCAGTTGCCGA TCAGCGAGTACCCGGAAGTAGTTCCACCGACCGTTGTGGTTCGTGCGAACTTCCCGGGTGCCAACCCTAAAGTCATCGGTGAAACCGTGGCCGCTCCATT GGAGCAAGCCATCACCGGCGTCGAGAACATGCTGTACATGTCCTCGCAGTCCACCGCTGACGGCAAAATCACGCTGACCATCACCTTTGCGCTGGGCACC GACCTGGACAACGCACAGGTACAGGTGCAGAACCGCGTGACCCGGACCGAGCCGAAACTTCCAGAAGAAGTGACGCGCATCGGTATCACTGTGGACAAGG CTTCGCCCGACCTGACCATGGTTGTGCACTTGACCTCGCCGGACAAACGCTACGACATGCTCTACCTGTCCAACTACGCCTTGCTCAACATCAAGGATGA GCTGGCGCGTCTGGGCGGTGTCGGTGATGTGCAGCTGTTCGGCATGGGCGATTATTCGCTGCGGGTCTGGCTCGATCCGAACAAGACCGCTTCGCGCAAC CTGACCGCCACCGATGTCGTAACCGCAATCCGTGAGCAAAACCGTCAGGTAGCTGCCGGTGCGTTGGGTGCACCTCCTGCACCGAGTGCCACCGCGTTCC AGCTGTCGGTCAACACGCAAGGTCGTCTGGTTTCTGAAGAAGAGTTCGAAAACATCATCATTCGCTCCGGCGAAAACGGTGAAATCACTCGCCTGAAAGA TATCGCTCGCATTGAGTTGGGTTCCAGCCAATACGCGTTGCGTTCGCTGCTGAACAACCAACCGGCAGTGGCGATCCCGATCTTCCAGCGCCCTGGTTCC AACGCAATCGAAATTTCCAACGAAGTGCGCGACAAGATGGCGGAGCTGAAAAAGAGCTTCCCGGAAGGCATGGACTTCAGCATCGTCTATGACCCGACGA TCTTCGTGCGCGGCTCCATCGAGGCAGTGGTTCATACCCTCTTCGAAGCGCTGATCCTCGTTGTGCTGGTGGTGATCCTGTTCCTGCAAACCTGGCGCGC CTCGATCATTCCGTTGGTGGCGGTGCCGGTTTCGCTGATCGGTACGTTTGCCGTGATGCACCTGTTCGGCTTCTCGCTGAACGCCTTGTCACTGTTCGGG CTGGTGTTGGCCATCGGTATCGTGGTGGACGACGCCATCGTGGTGGTGGAGAACGTCGAGCGAAATATCGGACTGGGATTGACGCCGGTCGAAGCAACCA AACGTGCGATGCGTGAAGTGACCGGCCCGATCATCGCGACGGCGCTGGTGTTGTGTGCGGTGTTTATCCCGGCCGCGTTCATCTCTGGCTTGACCGGTCA GTTCTACAAACAGTTCGCCCTGACCATTGCGATCTCGACCGTGATCTCGGCGTTCAACTCGCTGACCCTGTCGCCCGCCCTGGCTGCGGTGTTGCTCAAA AGCCATGACGCGCCGAAGGACCGTTTCTCCAAGGTCCTCGACAAGATCTTCGGTGGCTGGCTGTTCCGCCCATTCAACCGCTTCTTCGACAAGGCCAGCC ATGGTTATGTCGGCACCGTGGGCCGGGTTATCCGCAGCAGCGGCATCGCCCTGCTGTTGTACGCAGGCCTGATGGTGCTGACCTTCTTCGGTTTCGCCAA CACCCCGACCGGTTTCGTACCCGGCCAGGACAAGCAATACCTGGTGGCCTTCGCGCAACTGCCGGACGCCTCGAGCCTGGACCGTACCGAAGACGTGATC AAACGCATGTCCGACCTCGCCCTGAAACAGCCAGGCGTGGAAAGTGCCGTGGCCTTCCCGGGCCTGTCGATCAACGGTTTCACCAACAGCCCTAACGCCG GCATCGTGTTCGTCACCTTGAAACCGTTCGACGAGCGTAAAGACCCGAGCATGTCTGCCGGTGCGATTGCCGGTGCATTGAACGGCCAGTACGCCGGGAT TCAGGAAGCCTACATGGCGATCTTCCCGCCGCCGCCGGTACAAGGCCTGGGCACCATTGGTGGTTTCCGCCTGCAGATCGAAGACCGGGGCAACCTGGGC TATGACGAGCTGTACAAAGAAACCATGAACATCATCACCAAGAGCCACAACGTGCCGGAACTGGCCGCCCTGTTCACCAGCTACACCGTGAACGTGCCGC AAGTCGATGCAGCTATCGACCGGGAAAAAGCCAAGACTCACGGCGTGGCCGTCAGCGACATCTTCGACACCCTGCAGATCTATCTGGGTTCGCTGTATGC CAACGACTTCAACCGCTTCGGTCGCACCTACCAGGTCAACGTTCAGGCCGAACAGCAGTTCCGTCTCGAACCGGACCAGATCGGTCAGCTGAAAGTGCGT AACAACAAAGGCGAGATGATCCCGCTGGCGACCTTCATCAAGGTCAGCGACACCTCGGGCCCGGACCGCGTGATGCACTACAACGGCTTCATCACTGCTG AAATCAACGGTGCGGCAGCCCCCGGCTACAGCTCCGGCCAGGCCGAAAAAGCCATCGAGAAACTGCTCAAGGAAGAACTTCCGAACGGCATGACCTACGA GTGGACCGACCTGACCTACCAGCAGATTCTGTCCGGCAACACCGCACTGTTCGTGTTCCCGCTCTGCGTACTGCTGGCGTTCCTGGTGCTCGCCGCTCAA TACGAAAGCTGGAGCCTGCCACTGGCGGTGATCCTGATCGTACCGATGACCCTGCTGTCGGCCATCACCGGTGTGATTGCTTCGGGTGGCGACAACAACA TCTTCACCCAGATCGGCTTGATCGTACTGGTGGGACTTGCCTGTAAGAACGCGATTCTGATCGTCGAGTTTGCCAAGGATAAACAGCAGGACGAAGGTCT CAGCCCGCTCGACGCGGTACTGGAAGCTTGCCGTCTGCGTCTGCGGCCGATCCTGATGACTTCCTTCGCGTTCATCATGGGTGTTGTGCCTCTGGTGTTC TCCAGCGGTGCCGGTGCCGAAATGCGTCATGCCATGGGTGTGGCAGTGTTCTCCGGGATGCTCGGGGTGACCTTCTTCGGTCTGTTGCTGACGCCAGTGT TCTACGTACTGATTCGTAACTTTGTGGAGCGCGGTGAAAAGCGCAAAGCGGCCAAGGCCCTGAAACTGGAGGCGCAACAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCTGAAAGCCTTCCTGCCGAGCCTTCTGGTACTGGCCCTGAGTGCCTGTGCCGTCGGCCCGGACTACAAGACCCCAGCCACTGAGCCGGCCAACATCAC CACCGCCACCGATGGCAGCGCCGGTCAGAAAAACTTCGACCGCTCGCGTTTCGAAGGCATCTGGTGGCAGCAGTTCGAAGACCCGACCCTCAACCAGTTG GTGACTCAATCGCTGAAAGGCAACCGTGATTTGCGCGTAGCCTTCGCTCGCTGGAAAGCGGCCCGGGCGATTCGCGATGACGTCAGCAATGACGCCATGC CAACCATCACCAGCCGGGTCAGCAGTGACCTGGCCAAGGGTCAGATTCCGGGCCAGACCACCAAGCGGGTCAATAGCGAACGCTACGACCTGGGTCTGGA CATGGCGTGGGAGATCGACCTGTTTGGCCGTATCCAGCGCAATCTGGAATCCGCCGACGCCGAACAGCAAGCGCTTGAAGCCGATCTGTACCAACTGCAA
Amino Acid Sequence
>transporter
MNFSQFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGT DLDNAQVQVQNRVTRTEPKLPEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYALLNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTATDVVTAIREQNRQVAAGALGAPPAPSATAFQLSVNTQGRLVSEEEFENIIIRSGENGEITRLKDIARIELGSSQYALRSLLNNQPAVAIPIFQRPGS NAIEISNEVRDKMAELKKSFPEGMDFSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLTPVEATKRAMREVTGPIIATALVLCAVFIPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK SHDAPKDRFSKVLDKIFGGWLFRPFNRFFDKASHGYVGTVGRVIRSSGIALLLYAGLMVLTFFGFANTPTGFVPGQDKQYLVAFAQLPDASSLDRTEDVI KRMSDLALKQPGVESAVAFPGLSINGFTNSPNAGIVFVTLKPFDERKDPSMSAGAIAGALNGQYAGIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLG YDELYKETMNIITKSHNVPELAALFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQIYLGSLYANDFNRFGRTYQVNVQAEQQFRLEPDQIGQLKVR NNKGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGAAAPGYSSGQAEKAIEKLLKEELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVIASGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQQDEGLSPLDAVLEACRLRLRPILMTSFAFIMGVVPLVF SSGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRNFVERGEKRKAAKALKLEAQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site