Pseudomonas sp. GM41(2012), PMI27_002789

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_002789
NCBI Locus Tag	PMI27_RS13330
Name
Replicon	ctg3
Genomic location	250385 - 252172 (+ strand)

Cross-References

RefSeq	WP_008150083.1
GI	495425386
INSDC	EUB73046.1
NCBI Locus Tag	PMI27_RS13330
NCBI Old Locus Tag	PMI27_002789
UniParc	UPI0002704B76
UniProtKB Acc	W6V2K0
UniProtKB ID	W6V2K0_9PSED
UniRef100	UniRef100_W6V2K0
UniRef50	UniRef50_Q9I365
UniRef90	UniRef90_I4Y4P8

Product

Feature Type	CDS
Coding Frame	1
Product Name	type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.34
Kyte-Doolittle Hydrophobicity Value	-0.261
Molecular Weight (kDa)	68.0
Isoelectric Point (pI)	6.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000087 (1217 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_002789 Search term: type VI secretion protein

Human Homologs

References