Pseudomonas sp. GM41(2012), PMI27_002670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM41(2012) ctg3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCAAGCGGGCGGCATCGAGTGCTACCCGGTGACCGGCGAGATCACTTACGGCCTCGAGCGCCTGGCCATGTACCTGCAAGGCGTGGACTCGGTCTACG ACCTGGTCTGGGCTGACGGTCCGATGGGCAAAGTGACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCGACCTACAACTTCGAACACGCCAA CGTCGAGAAGCTGTTCGAACTGTTCGATTTCTACGAAAGCGAAGCCAAGCGCCTGATCGAACTCGACCAGCCGCTGCCGTTGCCGAGCTACGAAATGGTG TTGAAGGCCTCCCATACCTTCAACCTGCTGGATGCGCGCCGGGCAATCTCGGTGACCGCGCGTCAGCAATACATTCTGCGTGTCCGCACCCTGGCGCGTT CCGTTGCGCAAGCTTACCTGCTGGCTCGCGCCAAGCTGGGCTTCCCAATGGCGACCCCGGACCTGCGTGACGAAGTACTGGCCAAGCTGGAGGCAGCACA
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| DNA Sequence for Gene |
>PMI27_002670
ATGAGTGCTCTGGATTTTCTGGTTGAACTGGGCACCGAAGAACTGCCACCCAAAGCCCTGAACACCCTGGCCGAGGCGTTTCTTGCCGGTATCGACAAGG GTCTGCAAGCCGCTGGCCTGAACTACGAGACCAAAACCGTCTACGCCGCACCACGTCGTCTGGCTGTGCTGATCACCGATCTGGCGACTCAGCAGCCGGA TCGCAGCATCAACCTCGACGGCCCGCCACGTCAGGCCGCATTCGATGCCGAAGGCAACCCGACTCAAGCGGCATTGGGTTTCGCCAAAAAGTGTGGCGTC GACCTGAGCGAAATCGATCAAAGCGGCCCGAAACTGCGTTACAGCCAAAGCATCGCCGGCAAACCGACCGCGAGCCTGCTGCCGACCATCGTCGAAGATT CCCTGAACGACCTGCCGATTCCCAAGCGCATGCGCTGGGGTGCTCGCAAGGAAGAATTCGTTCGTCCGACCCAGTGGCTGGTGATGCTGCTCGGTGACCA GATCATCGATTGCACCATCCTCGCCCAGAAGGCGGGTCGCGATTCCCGTGGTCACCGCTTCCATCACCCGCAAAGCGTGCGAATCACCTCGCCGGCCAAC TACCTGACTGACCTGCGTGCTGCTTACGTACTCGCCGACACAAACGAGCGTCGCGAACTGATCAGCAAGCGCGTAGATGAGCTGGCGACAATGCAGGAAG GCACGGCGATCGTACCGCCAGCCTTGCTGGATGAAGTGACCGCGCTGGTTGAATGGCCGGTGCCGCTGGTGTGCTCGTTCGAAGAACGTTTCCTCGACGT GCCGCAAGAAGCCCTGATCACCACCATGCAGGACAACCAGAAGTATTTCTGCCTGCTGGATGCCGACGGCAAGTTGCTGCCACGTTTCATTACCGTGGCC AACATCGAAAGCAAAGACCCGCAGCAGATCATCGCCGGTAACGAGAAAGTGGTTCGCCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAAGACAAGA AGCAGAAACTCGAAGACTTCAACCTGCGTCTGCAAAACGTGGTGTTCCAGGAAAAACTCGGCAGCGTCTACGACAAGGCCGAGCGCGTTTCCAAACTCGC TGCGTTCATCGCTCAACGCATTGGCGGTAACGCCGCGTGGGCTTCCCGTGCAGGCCTGCTGTCCAAGTGCGACCTGGCGACCGAGATGGTCGGTGAGTTC CCGGAGATGCAAGGTGTCGCCGGTTACTACTACGCCCTCAACGACGGCGAGCCGGAAGAAGTCGCTCTGGCACTGAACGAGCAGTACATGCCGCGCGGTG CCGGTGCTGAACTGCCGGCCACCCTGACCGGTGCGGCCGTGGCCATCGCTGACAAGCTCGACACACTGGTGGGCATTTTCGGTATCGGCATGCTGCCAAC CGGTAGCAAAGACCCGTATGCCTTGCGTCGTGCTGCACTCGGCGTGTTGCGCATCCTGATCGACAAGAAGCTCGACCTCGACTTGAACGATGCCGTGGCG TTCGCCGTGAATGCGTTCGGTACCAAGGTCAAGACTGCCGGCCTCAACGATTCGGTGCTGGAGTTCATCTTCGACCGTCTGCGTGCCCGTTACGAAGACG AAGGCGTTGATGTCGGGACTTACCTGTCGGTGCGTGCCCTGAAACCGGGTTCGGCACTGGACTTCGATCAGCGCGTACAAGCGGTAGAAGCTTTCCGCAA ATTGCCGGAAGCCGCTGCCCTGGCCGCGGTGAACAAGCGCGTTTCGAACTTGCTGAGCAAGGTCGAAGGCTCTGTTCCTTCGGTCGTGGAAGCCAAGTAC TTCGACAATGCCAACGAGTTCTCCCTGTATTCGGCGATCCAGCAGGCTGACCAGGCTGTCCAGCCGATGGCTGCGGCGCGTCAGTACAGCGAATCGCTGG CACGTCTGGCTGCCTTGCGCGAGCCGGTGGATGCGTTCTTCGAAGCCGTGATGGTCAACGCTGAAGATGCCAAGGTCCGCGCCAACCGTTATGCGCTGCT GTCGCGTCTGCGTGGGCTGTTCCTCGGCGTCGCCGACATTTCGCTGCTGGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGCTGCCGTTGAAACTGCTGATTCTCGATCGGGACGGGGTGATCAATTACGACTCCGACGCTTACATCAAGTCGGTGGAGGAGTGGATTCCGCTCCCG GGTTCGATCGAAGCCATCGCGCAGTTGAGCAAGGCCGGCTGGACGGTAGCGGTGGCTACCAACCAGTCGGGCATCGCTCGCGGCTATTACGACATCGCCA CCCTGGACGCCATGCACGAGCGCTTGCGCTCGTTGGTGGCGGAGCAGGGCGGTGAAGTCGGGCTGATCGTCTATTGCCCGCACGGGCCGGACGATGGCTG CGATTGCCGCAAACCAAAACCCGGGATGTTGAAAACCATCGCCGCGCATTACAACGTATCGCTGACCAATCTTTGGTTCGTCGGCGATACCCTTGGTGAC CTGGAGGCCGCCAAAGCCGTCGATTCTCAGCCAGTTTTGGTAAAGACCGGGAAAGGCGAAAAGACTTTGGGCAAGACCCTACCGGTAGGCACCTTGATTT
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| Amino Acid Sequence |
>glycyl-tRNA synthetase
MSALDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYETKTVYAAPRRLAVLITDLATQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGV DLSEIDQSGPKLRYSQSIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDQIIDCTILAQKAGRDSRGHRFHHPQSVRITSPAN YLTDLRAAYVLADTNERRELISKRVDELATMQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEDFNLRLQNVVFQEKLGSVYDKAERVSKLAAFIAQRIGGNAAWASRAGLLSKCDLATEMVGEF PEMQGVAGYYYALNDGEPEEVALALNEQYMPRGAGAELPATLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLNDAVA FAVNAFGTKVKTAGLNDSVLEFIFDRLRARYEDEGVDVGTYLSVRALKPGSALDFDQRVQAVEAFRKLPEAAALAAVNKRVSNLLSKVEGSVPSVVEAKY FDNANEFSLYSAIQQADQAVQPMAAARQYSESLARLAALREPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADISLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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