Pseudomonas sp. GM41(2012), PMI27_004584

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM41(2012) ctg4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGACCACGCGCTTGTTGTTCGAGTCCAAGCGCAGCGGTACATTGCCGGAATTCAAGCCTTCAGAGGTCCTTGGTCATATCAACCGAGGCCTGATCAGTT GTAAGCTGGGTAAACACGTCACAATGGTCGGTGGAGTCATCGACGAGGAGACAGGTTTGTTGACCTATAGCATCGGTGGTCATTTGCCGTTGCCTGTGTT GTACACGCCAGACAGTGTTCGTTATCTGGAAGGGCGTGGTCTGCCGGTAGGCCTCTTCAACGAAGCCACCTACGAAGATCACGTACTGGAGCTGCCGCCG ACATTCAGCCTGACGCTGATGTCCGACGGCATTCTGGACCTTTTGCCAGAACCTACACTCAAAGAAAAAGAAGCGGCTTTGCCTCAACGGGTCAAGGCAG CGGGCGGCAGCCTGGATGGTCTGCGGCAGGTTTTTGGATTGGCCACGCTAGGGGAGATGCCGGATGATATCGCCCTGTTGGTGTTGAGCAGGAATCTTTA
DNA Sequence for Gene
>PMI27_004584
ATGAGTACCGGTAGAATCCAGTTCGCCGAGCAGGATGGCACCTTCGTCCTGAAGTTCGTCGGTGAAGTTCGCCTGACCCTGTGTTCGGCGTTGGATGCGA CTATTGAGCGGATCTTCACGGCGTTGAACTTCAACGCAATCGTGATCGACCTGACCGAAACCCGCAGCATCGACAGCACCACGTTGGGCCTGCTGGCCAA GCTGTCGATCCTGTCGCGGCAAAAGGTCGGCTTGCTGCCGACCGTGGTCACCACCCACGAAGACATCACCCGTCTGCTGCAGTCCATGGGCTTCGAGCAA GTGTTCAACATCGTTGACCGCCCGATCCCGTGCCCTGAGTGCCTGACCGACCTGCCAGACCAGGATCAGTCCGAAGAAGTGGTGCGGATCAAAGTGCTCG AAGCACACAAGATCCTTATGGGCCTGAACGACTCCAATCGTGAAGCGTTTCATGATCTGGTGAATGCCCTCGAGCGTCATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGCTTGAAGTGATGTGGGTTCGAAGGCCCCATCGCGAGCAGGCTCGCTCCCACATTAGTCTTGCGTCGAACACACCATCCCGGCTCCCCCAAAAATCTC CTGTGGGAGCGAGCCTGCTCGCGAAGGCGCCATAACAATCACCATATCTTTTAGCGCGAAGCCACTACCCAAATTCAACGCAAAAAAAGGGCGAACCCAT TAAGGTTCGCCCTTTTTGCATTTTCTTACTGGATCACAGCTTGGCTTGCAGCAACGCCTCAAGCTTTTCCTGGTCACGAGCGAACTGACGAATACCCTCA GCCAGTTTCTCGGTCGCCATCGCGTCCTCGTTGGACAACCAACGGAACTGCGCTTCATTCAAGCTCAAGCGGGCTTCACCAGCATGACCCGGCGCCAATT TGCGTTCCAGCTTGCCAGTGTCCGCCGCCAGCTTATCAATCAGATCCGGGCTGATGGTCAGACGGTCGCAACCGGCCAGTTGCTCGATCTGATTCAGGTT
Amino Acid Sequence
>anti-anti-sigma factor
MSTGRIQFAEQDGTFVLKFVGEVRLTLCSALDATIERIFTALNFNAIVIDLTETRSIDSTTLGLLAKLSILSRQKVGLLPTVVTTHEDITRLLQSMGFEQ VFNIVDRPIPCPECLTDLPDQDQSEEVVRIKVLEAHKILMGLNDSNREAFHDLVNALERH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site