Pseudomonas sp. GM41(2012), PMI27_004510

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_004510
NCBI Locus Tag	PMI27_RS04950
Name
Replicon	ctg4
Genomic location	761207 - 763564 (+ strand)

Cross-References

RefSeq	WP_008146793.1
GI	495422096
INSDC	EUB72588.1
NCBI Locus Tag	PMI27_RS04950
NCBI Old Locus Tag	PMI27_004510
UniParc	UPI00026FE720
UniProtKB Acc	W6UZY3
UniProtKB ID	W6UZY3_9PSED
UniRef100	UniRef100_W6UZY3
UniRef50	UniRef50_Q9KTD1
UniRef90	UniRef90_F2KEJ8

Product

Feature Type	CDS
Coding Frame	1
Product Name	NAD-dependent DNA ligase LigA
Synonyms
Evidence for Translation
Charge (pH 7)	-16.40
Kyte-Doolittle Hydrophobicity Value	-0.155
Molecular Weight (kDa)	85.7
Isoelectric Point (pI)	5.56

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003829 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_004510 Search term: NAD-dependent DNA ligase LigA

Human Homologs

References