Pseudomonas sp. GM41(2012), PMI27_004916

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM41(2012) ctg6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGTCAAGAAAGCCCTCACCGGTATGCTGGGCAGCGATGTTCGCGAGAACATCCTGGGTACCGCTGAAGTGCGTGATGTGTTCCGTTCGCCGAAGTTTGG CGCGATCGCCGGTTGCATGGTTATCGAAGGTGTTGTTCACCGTAACCGTCCAATCCGTGTACTGCGTGAAGACATCGTTATCTTCGAAGGCGAGCTGGAA TCCCTGCGCCGCTTCAAGGATGACGCTTCCGAAGTACGTGCCGGCATGGAATGCGGTATCGGCGTGAAGAGCTACAACGACGTTAAAGTCGGTGACAAGA TCGAAGTCTTCGAGAAGGTTCAGGTTGCTCGCAGCCTCTAACTCGCGCACTTCAAGGGCCACGATGAGCCGCCGCATGCAGATGCGCAGCGCAGCGTCAG GACTCTAAACGCAACGCCCGGTCTGGCTTTTGTCAGGCCGGGCGTTTGCCGCTTTCAGACCCCATGGGTTTCACCGTGTGGCAGTAACAGGTAACAAGAC
DNA Sequence for Gene
>PMI27_004916
ATGGCAAAAGAATACAGCCGTACCCAACGTATCGGCGATCAGATGCAGCGTGAGCTGGCACAGCTGATCCGTCGTGAAGTCAAAGACCCGCGCGTCGGCC TGGTCACCATTACCGCTGTTGAAGTCAGCCGTGACGTCGGTCACGCCAAGATCTTCATCACCGTGATGGGGCAAGACAACGCTGAAGACATCGCGCAAAG CATCAAGGTGCTCAACTCCGCTGCCGGTTTCCTGCGCATGCAGTTGGCTCGCGAAATGAAGTTGCGCAGCGTTCCACAGTTGCACTTCCACTACGACGAA AGCGTCGTGCGTGGTGCTCATCTGTCGGCATTGATCGAACGTGCGGTAGCTGAAGACAATCAGCATCCGGTTGCGGCAGAAGCCGAAGACACCAAGGAGT AA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGTGGCTCAGGTCAAACGTATCCGTCGTAACGTCAGCGGTATCATCCTGCTCGACAAGCCACTGGGGTTCACCTCCAATGCGGCGTTGCAGAAGGTTC GCTGGTTGCTGAACGCCGAGAAGGCCGGGCACACCGGCAGTCTCGATCCGCTGGCCACTGGCGTGTTGCCGTTGTGCTTCGGTGAGGCCACCAAGTTTTC GCAATACCTGCTCGATTCCGACAAGGGTTACGAAACCCTGGCGCAACTGGGCAAGACCACCACCACGGCCGATGCCGAGGGTGATGTGTTGCTGGAGCGC CCGGTGACCGTTGGTCGCGCCGATGTCGAAGCAGTACTGCCGAAATTTCGTGGGCAAATCAGTCAGATACCGCCCATGTACTCGGCGCTCAAACGTGATG GCCAGCCGTTGTACAAGCTGGCGCGGGCAGGTGAAGTAGTGGAGCGCGAACCGCGTTCTGTTACTATTACGCGCTTGGAATTACTGGCCTTTGAAGGTGA
Amino Acid Sequence
>ribosome-binding factor A
MAKEYSRTQRIGDQMQRELAQLIRREVKDPRVGLVTITAVEVSRDVGHAKIFITVMGQDNAEDIAQSIKVLNSAAGFLRMQLAREMKLRSVPQLHFHYDE SVVRGAHLSALIERAVAEDNQHPVAAEAEDTKE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site