Pseudomonas sp. GM41(2012), PMI27_005276
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM41(2012) ctg8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGAAGGCATCGATCTCGACGCGCAGGCCAAGGCGCAATTACAAGTGATGCTGGAGTTCATGAAGGCTGATCCGACGGTCAACCACATCGAGCTCGATGG CCACTCCGATAACAGCGGCAACCGCCTGACCAACCGTGACCTGTCGCGGCGTCGGGCCCTGGCCGTCATGGAGTTCTTCAAGGCCAACGGCATTCAGGAA TCGCAGATCACCGTGCGCTTTCACGGCGAGCGTTATCCACTGGCGCCCAATACCAATTCCGCCAACCGGGCGAAGAACCGTCGGGTCAATGTACACCTCG CGCGCGTTGCGCCCACCGAAAAGCCGGCCCCTCAGGCCACTGCATCGGCGAGCGCCGCGTCGACCTCCTGAACCCGCTGTTATCGTCGCTCACTCGACAT AATCTGTCGCTTCGTCGTCATAAGCTGTCGCGCCTCTGTAAATTATCCTGCATGACCGGTAGACTTGACGGCTTTCCGTAGAACCCCGTGGAGTGATGGC
|
|
| DNA Sequence for Gene |
>PMI27_005276
ATGGCGGACGTAAACAAGGTCGTTCTGGCGTATTCCGGCGGCCTGGACACTTCGGTGATCCTCAAGTGGCTGCAGGATACTTATAACTGTGAAGTCGTGA CCTTCACCGCTGACCTGGGTCAGGGCGAAGAAGTCGAACCTGCACGCGCCAAGGCACAGGCCATGGGCGTGAAAGAGATCTACATCGACGACTTGCGCGA AGAATTCGTGCGCGATTTCGTTTTCCCGATGTTCCGCGCCAACACCGTTTACGAAGGCGAGTACCTGCTGGGTACTTCCATCGCTCGTCCGTTGATCGCC AAACGCCTGATCGAAATCGCCAACGAAACCGGCGCTGACGCCATTTCCCACGGCGCCACCGGCAAGGGTAACGACCAGGTTCGTTTCGAACTGGGCGCCT ACGCCTTGAAGCCAGGTGTGAAAGTGATCGCTCCGTGGCGCGAATGGGACCTGCTCTCCCGTGAAAAGCTGATGGATTACGCTGAAAAGCACAACATCCC GATCGAGCGTCACGGCAAGAAGAAATCCCCGTACTCGATGGATGCCAACCTGCTGCACATCTCCTATGAAGGCGGCGTGCTGGAAGACACCTGGACCGAG CACGAAGAAGACATGTGGAAATGGACCGTCTCCCCGGAGAAGGCTCCAGATAAAGCGCAATACCTGGAACTGACCTACCGCAACGGCGACATCGTGGCAC TGGACGGCGTCGAAATGACCCCGGCCACCGTGCTGGCGACGCTGAACAAGATCGGTGGCGAACACGGTATCGGCCGTCTCGACATCGTTGAGAACCGTTA CGTGGGCATGAAGTCCCGTGGCTGCTACGAAACCCCAGGCGGCACCATCATGCTGCGCGCCCACCGTGCGATCGAATCGATCACCCTGGACCGCGAAGTG GCTCACCTCAAAGACGAGCTGATGCCTAAATACGCCAGCCTGATCTACACCGGTTACTGGTGGAGCCCTGAGCGTCTGATGCTGCAACAGATGATCGATG CATCCCAGGCCCACGTGAACGGCGTTGTGCGCCTGAAGCTGTACAAGGGCAATGTGATCGTCACCGGTCGCAAGTCCGACGAATCGTTGTTCGATGCCAA CATCGCGACCTTCGAAGAAGATGGCGGCGCCTACAACCAGGCCGACGCAGCGGGCTTCATCAAGCTCAACGCGTTGCGCATGCGTATTGCGGCAAACAAA GGCCGGAAGCTTTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GATCTTTGAAACCGTAGAGTTGTGGCCTTGTCGGTGACAAGGCCACAATTTCTGAATAGGGGGGGAGTTTTCCTGCCGGACATCGTGTTATCAGCGCTCT TTTTGTATCTGTAATACCTTCCTTCTGTTTCCTCTCTCTGAATGCTCTTCAAGCGTTACCTGCTTCGTGTCAGGTAAAAAGAGTGATCAAGAATCGTCAG ACCGTGTGAATTCAAATTGTAAGCAATGCAAAGCGTTGGGCCGTTGCGATTCTTTGCCTGTTTTGAATGCTTGCTTGCGCTTTCCTTCAGTAATGCCTCC GAATCGGTACAGGTGAGAAATACGATCACTTGTGCAGGGCTTCCCTGTGGGTGACGGTTTTTTTCAATCCAAGCGCCGAACTCCATTTTCTTGTTTAGCC ACCGCGCATCGACGATGTGCAGGTTTTTTAGCTGCTCGGCCATGCAAACGTGCTGTAGAGCCGAGAGTCCCGTCTGAATACTGATCCCGGCGGGAGGATC
|
|
| Amino Acid Sequence |
>argininosuccinate synthase
MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIA KRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKKKSPYSMDANLLHISYEGGVLEDTWTE HEEDMWKWTVSPEKAPDKAQYLELTYRNGDIVALDGVEMTPATVLATLNKIGGEHGIGRLDIVENRYVGMKSRGCYETPGGTIMLRAHRAIESITLDREV AHLKDELMPKYASLIYTGYWWSPERLMLQQMIDASQAHVNGVVRLKLYKGNVIVTGRKSDESLFDANIATFEEDGGAYNQADAAGFIKLNALRMRIAANK GRKLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|