Pseudomonas taiwanensis DSM 21245, H620_RS0113565
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00022.22_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTCCCGCGAGGAGCAACTCGACCCGCTCACCCTCAAGGGCTCCTACGCCGGTGCCATGGGGCTGCCGCAGTTCATGCCCAGCAGTTTCCGTAACTATG CGGTCGACTTCGACGGCGATGGCCACATCAACATCTGGAACAATCCCGATGATGCCATCGGCAGCGTCGCCAGCTATTTCAAGCGCCATGGCTGGGTAGC TGGCGAGCCTGTGGTCAGTCGGGCCCAGGTGGCCGGTACACAGGCCGACCAGGGGCTGACGACCGGCATCGAGCCGGTGAAGACGGTTGGGGAGTTGCGA GCGCTAGGCTGGTCGAGTCATGATGCGCTGCGCGATGATCTGCCAGTGACCGCCTTCCGCCTGGAAGGTGAAAACGGCCCCGAATATTGGATGGGCCTGA AGAATTTCTACGCGATCACTCGCTACAACCGCAGCGTGATGTATGCCATGGCGGTGCATCAGCTTTCGGAACAGCTGGTTCAAGCACGGGGCGTCAAGTA
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| DNA Sequence for Gene |
>H620_RS0113565
ATGCGCGCAATCATCTCTGCCAACTCCTTCAAGTTGCTGACCTGTGTCGCGGTCGGCCTGGCGCTGGCCAGTTGTTCGTCCAGCCGCCCAACCTCCCAGC AGAGCGGTAACGTGGTCCGTTCCCAGCCTGGACTGGATATCAACCGTGCCCACAAGGACGGTGCGCCCTGGTGGGACGTGGACGTGAACAAGATCCCCGA TGCCACGCCCACCGTGCACACCGGCCCCTACAAGGCCAACCCGTACACGGTGTTGGGCAAGACCTACTACCCGATGCAAGACGCGCGCAATTACCGCGCC GAAGGCACGGCGTCGTGGTACGGCACCAAGTTCCACGGTCAGAACACCGCCAATGGCGAGCTCTATGACCTCTATGGCATGAGCGCGGCGCACAAGACGC TGCCGCTGCCTGCCTATGTGCGAGTGACCAACCTGGCCAACGGCCGCAGTGTGATCCTACGGGTCAATGACCGTGGACCGTTCTATTCGGACCGGATCAT CGACTTGTCCTACGCGGCGGCGAAGAAGCTCGGTTACGCCGAGATCGGTACCGCCCACGTGCGGGTCGAGGGTATCGACCCGCAGCAATGGTGGGCCCAG CGTGGCCAGCAGCCGCCCCTGATGCTCAAGGAGCCTCAGGTGGCCCAGGCTCAGCCGATTCCGGCCAGCACCGGGCGCGTCGAGCAGTGGACGCCGCCGC CGCAGCAGCACGCCGCACCTGTGGTGCCGGTGCAGGTTGGCGGCAACAATGTGCCAAGCGGCAACGGCGGCAGCTTCCTGCAAGTGGGGGCGTTCGCCAA CCCGGACGCCGCCGAGCTGCTGCGTTCGAAACTGAGCACCATGGTCAGCGCCCCGGTGTTCATCAGTTCCATCGTGCGTAACCAGCAGACCCTGCACCGT GTTCGCCTGGGACCGATCGGCAGCCAGGGCGAGATCCAGCAGGCTCAGGACAGCATTCGCCTGGCGAACTTGGGGCAGGCAAAGCTGGTCACAGCTGACT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTGTCGACGGCAACAGGGCCGGTACTGAACCATGCCAAACTGTCGGTTTTGTCATGAATTGGCGGGCGCAGGCATGTACAATGGCCGCTTTTGCTGCC GGCCAGGGAACCCTTGCCCTCCGGGCATCAGACCATTAGCGATTTTCGAGAGACGGATGAACATCACCAAGCTTGCCAAACGACTTTGCCTGCCCGTACT GCTGATGATCACGCCTGCCGCTTTCGCGGCGGAGCAGATGATGCCATCGCCACCGCAGCTGGCGGCCAAGTCCTACGTACTCATGGACGCGTCCAGCGGC AACGTGCTGGTCGAGAACAACGGTGACGAGCGTCTGCCGCCAGCCAGCCTGACCAAGCTGATGACCGCTTACATCGCCACCCTGGACATCCGCCGTGGCC AGATCGGCGAGAACGACCCGGTCACCGTCAGCGAAAACGCCTGGCGCACCGGTGGTTCGCGCATGTTCATCAAAGTGGGCAGCCAGGTCACCGTCAGCGA
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| Amino Acid Sequence |
>rare lipoprotein A
MRAIISANSFKLLTCVAVGLALASCSSSRPTSQQSGNVVRSQPGLDINRAHKDGAPWWDVDVNKIPDATPTVHTGPYKANPYTVLGKTYYPMQDARNYRA EGTASWYGTKFHGQNTANGELYDLYGMSAAHKTLPLPAYVRVTNLANGRSVILRVNDRGPFYSDRIIDLSYAAAKKLGYAEIGTAHVRVEGIDPQQWWAQ RGQQPPLMLKEPQVAQAQPIPASTGRVEQWTPPPQQHAAPVVPVQVGGNNVPSGNGGSFLQVGAFANPDAAELLRSKLSTMVSAPVFISSIVRNQQTLHR VRLGPIGSQGEIQQAQDSIRLANLGQAKLVTAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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